DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and tor-1

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001369805.1 Gene:tor-1 / 189605 WormBaseID:WBGene00006597 Length:310 Species:Caenorhabditis elegans


Alignment Length:293 Identity:103/293 - (35%)
Similarity:162/293 - (55%) Gaps:9/293 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 FAECCDDRNIPARID--ELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQPGT 112
            |..||.:.:|   .|  :|.|.|.|.:.|||:|...:|.::|:| ......:||||:||||.|||
 Worm     7 FCTCCFETDI---FDYLKLHRDLSRFIYGQHLVIDTVVRSIKSH-WHNEHPQKPLVLSFHGGPGT 67

  Fly   113 GKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRSCPRSLFIFDE 177
            |||:|.|.||...:..|.:|.||..::...|||....:.:|::|:...:..:...|.||:|:|||
 Worm    68 GKNYVTEIIAKNTFRSGLQSPYVKYFVATKDFPNNKHIEDYKLKLKEQLIQSADGCDRSIFVFDE 132

  Fly   178 VDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASHLGSVMKNGRLREDTRLSDF 242
            |||:.|.:...:...:|:...|...|..|..||||||...|.||:......:|.:.|....|..|
 Worm   133 VDKLQSELVQTIKPFLDFYPAVFEVDFRKTTFIFLSNKGSSEIANIALEHRRNLKKRSQLELKHF 197

  Fly   243 EPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAEL-LRWRRDPKQANNQKII 306
            |..|...|:|..||::.|.:|.:.:|||:|||||:.|.:|.:|::..| .|.|.|  .|.:.:.:
 Worm   198 ERTLMSHAFNEKGGLRNTELISNQLIDHYIPFLPLSKFYVSQCIQVHLRKRGRHD--LAKDGEFM 260

  Fly   307 EDIINSSISYDRTHSLFAISGCKTLEKKVAMAI 339
            :.:::|...:..:..:|:.||||.::.|..:.|
 Worm   261 QRVLDSLEFFPESSKVFSSSGCKRVDAKTELEI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 47/126 (37%)
AAA 100..224 CDD:214640 51/123 (41%)
tor-1NP_001369805.1 Torsin 12..130 CDD:399367 44/121 (36%)
ClpA <13..250 CDD:223616 89/240 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159231
Domainoid 1 1.000 109 1.000 Domainoid score I3983
eggNOG 1 0.900 - - E1_KOG2170
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I2348
Isobase 1 0.950 - 0 Normalized mean entropy S4332
OMA 1 1.010 - - QHG49139
OrthoDB 1 1.010 - - D1453168at2759
OrthoFinder 1 1.000 - - FOG0001199
OrthoInspector 1 1.000 - - otm14120
orthoMCL 1 0.900 - - OOG6_104781
Panther 1 1.100 - - O PTHR10760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3548
SonicParanoid 1 1.000 - - X455
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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