DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and ooc-5

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_495916.1 Gene:ooc-5 / 174433 WormBaseID:WBGene00003870 Length:356 Species:Caenorhabditis elegans


Alignment Length:306 Identity:111/306 - (36%)
Similarity:177/306 - (57%) Gaps:4/306 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GAVGAVALGAYF--KEHTYCRFAECCDDRNIPARIDELERSLERTLIGQHIVRQHIVPALKAHIA 93
            |...|::.||::  |:...|...|||.:.::......|:..:...|.|||:|:..:|.::|:|..
 Worm    32 GTTIAISAGAFWGLKDRLKCYLYECCHEPDVNFNYHTLDADIANLLFGQHLVKDVVVNSIKSHWY 96

  Fly    94 SGNKSRKPLVISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRVKIN 158
            :.| .|||||:||||..|:|||:|||.||:..:..|.||.:|...:...|||.::::..|:|::.
 Worm    97 NEN-PRKPLVLSFHGYTGSGKNYVAEIIANNTFRLGLRSTFVQHIVATNDFPDKNKLEEYQVELR 160

  Fly   159 NAVRDTLRSCPRSLFIFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNTKAIFIFLSNTAGSHIASH 223
            |.:..|::.|.||:|||||.||:|..:...:...:||.:.:.|.|..::|||.|||..|..||..
 Worm   161 NRILTTVQKCQRSIFIFDEADKLPEQLLGAIKPFLDYYSTISGVDFRRSIFILLSNKGGGEIARI 225

  Fly   224 LGSVMKNGRLREDTRLSDFEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEA 288
            .....::|..||..||..||..|...:||..||::.:.:|.:|:||||:||||:::.||..|:.|
 Worm   226 TKEQYESGYPREQLRLEAFERELMNFSYNEKGGLQMSELISNHLIDHFVPFLPLQREHVRSCVGA 290

  Fly   289 ELLRWRRDPKQANNQKIIEDIINSSISYDRTHSLFAISGCKTLEKK 334
             .||.|......:|...:|.::||...:..:...|:.||||.::.|
 Worm   291 -YLRKRGRGDLVSNVDFVERVLNSLQYFPESSKAFSSSGCKRVDAK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 47/126 (37%)
AAA 100..224 CDD:214640 52/123 (42%)
ooc-5NP_495916.1 Torsin 51..177 CDD:148114 47/126 (37%)
AAA 102..227 CDD:214640 52/124 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159232
Domainoid 1 1.000 109 1.000 Domainoid score I3983
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 213 1.000 Inparanoid score I2348
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49139
OrthoDB 1 1.010 - - D1453168at2759
OrthoFinder 1 1.000 - - FOG0001199
OrthoInspector 1 1.000 - - otm14120
orthoMCL 1 0.900 - - OOG6_104781
Panther 1 1.100 - - LDO PTHR10760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3548
SonicParanoid 1 1.000 - - X455
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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