DRSC/TRiP Functional Genomics Resources

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Protein Alignment Torsin and tor4ab

DIOPT Version :9

Sequence 1:NP_001284866.1 Gene:Torsin / 31399 FlyBaseID:FBgn0025615 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001103331.1 Gene:tor4ab / 100126135 ZFINID:ZDB-GENE-070705-135 Length:373 Species:Danio rerio


Alignment Length:304 Identity:68/304 - (22%)
Similarity:123/304 - (40%) Gaps:61/304 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ECCDDRNIPARIDELERSLERTLIGQHIVRQHIVPALKAHIASGNKSRKPLVISFHGQPGTGKNF 116
            |..||..:...::.|||||.|.:.||....:.::..|..:: |....::||.:|.||..|.||:.
Zfish   108 ENLDDHVVKYDLEGLERSLHREVFGQQEALEELMDHLNDYL-STYAHQQPLALSLHGPSGVGKSH 171

  Fly   117 VAEQIADAMYLKGSRS----NYVTKYLGQADFPKESEVSNYRVKINNAVRDTLRSCPRS----LF 173
            :...:|     :..||    ..|..|:.:...|.:.|..:....|...:.:.:......    .|
Zfish   172 LGRLLA-----RHFRSIVDDKLVVHYISKHHCPLQEEAQHCASTIARRITEVVTQAEEEEQIPFF 231

  Fly   174 IFDEVDKMPSGVFDQLTSLVDYNAFVDGTDNT----KAIFIFLSNTAGSHIASHLGSVMKNG--- 231
            |.|||:.|...:.|.|.:.:.       :|.|    ..:::|||:...|.|.:|   |::|.   
Zfish   232 ILDEVEAMAPPLLDTLQTFLQ-------SDQTNEFLNVVYVFLSSLGQSEITAH---VLQNSSTA 286

  Fly   232 ----RLREDTRLSDFEPLLRKAAYNMDGGMKKTTMIESHVIDHFIPFLPMEKAHVIKCLEAELLR 292
                .||:  .|:...||..:.|..:                  |....:|:.|:|:|...|:..
Zfish   287 GAHKSLRQ--ALTLLHPLWMEPAVQV------------------IALSLLEREHIIQCFLEEMTL 331

  Fly   293 WRRDPKQANNQKIIEDIINSSISYDRTHS-LFAISGCKTLEKKV 335
            ....|...:.:::.::     ::|.|... .:|.:|||.:..||
Zfish   332 EGFYPDPGHVERLADE-----LAYHRAAGRQYAKTGCKQVVAKV 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TorsinNP_001284866.1 P-loop_NTPase 48..175 CDD:304359 30/130 (23%)
AAA 100..224 CDD:214640 31/135 (23%)
tor4abNP_001103331.1 P-loop_NTPase 111..211 CDD:304359 27/105 (26%)
CDC6 123..>275 CDD:224391 39/164 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580533
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2170
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.800

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