DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL30 and AT5G55140

DIOPT Version :10

Sequence 1:NP_525073.1 Gene:mRpL30 / 31398 FlyBaseID:FBgn0029718 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_568821.1 Gene:AT5G55140 / 835607 AraportID:AT5G55140 Length:109 Species:Arabidopsis thaliana


Alignment Length:31 Identity:10/31 - (32%)
Similarity:15/31 - (48%) Gaps:11/31 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EILNCTAEPYIDD---------RRLFVAGLD 189
            ||....|||:::|         ||  ::|.|
plant   165 EITEHRAEPFMNDEDALQSAKGRR--ISGAD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL30NP_525073.1 Ribosomal_L30_like 59..111 CDD:100098
AT5G55140NP_568821.1 rpmD_bact 19..72 CDD:130375
Blue background indicates that the domain is not in the aligned region.

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