DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL30 and mrpl30

DIOPT Version :10

Sequence 1:NP_525073.1 Gene:mRpL30 / 31398 FlyBaseID:FBgn0029718 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001018597.1 Gene:mrpl30 / 553799 ZFINID:ZDB-GENE-050522-240 Length:154 Species:Danio rerio


Alignment Length:120 Identity:43/120 - (35%)
Similarity:63/120 - (52%) Gaps:9/120 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QKFEGITYYPRTPDHQ---DPPVEPAKLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKN 94
            |.||     .|..:|.   ..|.:|.||..|.|:|.....||||.:::|.||| .|..:..|.||
Zfish    37 QVFE-----ERAKEHDKYGGDPEQPHKLHIVTRVKSTMRRPYWEKKVVKSLGL-MKSHEPRVHKN 95

  Fly    95 IPENNARLWKIKHLIKVTPVTFPYGEPTAQDVRHTILKENGECLVTKDLGPIDTR 149
            .|..|..|..||||:::.|:..|:|.|..:|:.:|.|...||.:|.:.|.|::.:
Zfish    96 TPSVNNLLKIIKHLVRIEPLKLPHGLPAEEDMANTHLNSRGELVVKRLLKPLEKK 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL30NP_525073.1 Ribosomal_L30_like 59..111 CDD:100098 22/51 (43%)
mrpl30NP_001018597.1 Ribosomal_L30 60..113 CDD:100100 22/53 (42%)

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