DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and ATOH8

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_011531441.1 Gene:ATOH8 / 84913 HGNCID:24126 Length:328 Species:Homo sapiens


Alignment Length:138 Identity:40/138 - (28%)
Similarity:60/138 - (43%) Gaps:19/138 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 AAQPAPPPPP----TPAPRRRT-----TPIAHLDPSELVGLSREERRRRRRATLKYRTAHA---- 114
            :|.||||.||    .|||..|.     :.|:|:..:.....|...|:|...||.......|    
Human   166 SAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIKALQQT 230

  Fly   115 ------TRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLETPXDSAGA 173
                  .|||.||...:.:|..|||.:|.....:||||:.||::|..||..|..:.:.. .:..:
Human   231 RRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSADHS 295

  Fly   174 SSFATSCL 181
            :...:.|:
Human   296 NLSFSECV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 23/69 (33%)
ATOH8XP_011531441.1 bHLH_TS_ATOH8 224..291 CDD:381427 21/66 (32%)

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