Protein Alignment HLH4C and Scx

DIOPT Version :9

• Sequence 1: NP_001259243.1
• Gene: HLH4C / 31397
• FlyBaseID: FBgn0011277
• Length: 191
• Species: Drosophila melanogaster
• Sequence 2: NP_001123980.1
• Gene: Scx / 680712
• RGDID: 1588254
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 69
• Identity: 34/69 - (49%)
• Similarity: 44/69 - (63%)
• Gaps: 9/69 - (13%)

  Fly    96 REERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYL 160
            ||.|:|        .||:| |||.|..:.|.:|..||.|:||.|.|:||||||.|:||..||::|
  Rat    75 REPRQR--------HTANA-RERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHL 130

  Fly   161 NHVL 164
            .:||
  Rat   131 GNVL 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH4C	NP_001259243.1	HLH	108..165	CDD:238036	30/57 (53%)
Scx	NP_001123980.1	bHLH_TS_scleraxis	76..143	CDD:381521	33/68 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810