DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and hand2

DIOPT Version :9

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_571701.3 Gene:hand2 / 58150 ZFINID:ZDB-GENE-000511-1 Length:205 Species:Danio rerio


Alignment Length:164 Identity:47/164 - (28%)
Similarity:74/164 - (45%) Gaps:27/164 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MIG--PNNPHLVNEDYAASTTLDIDKRFQARMACE---------TAAQPAPPPP-----PTPAPR 77
            ::|  |::|.:.::.|:          |.|...|.         ..:.|...||     |:.:| 
Zfish     3 LVGGFPHHPVMHHDGYS----------FAAASRCHEEPPYFHGWLISHPEMSPPDYTMAPSYSP- 56

  Fly    78 RRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDK 142
            ..:|....||.|...|:...........|:|.|.....:||.|.::.|.:|||||:.:|.:|.|.
Zfish    57 EYSTGAPGLDHSHYGGVPGAGAVGMGPRTVKRRPTANRKERRRTQSINSAFAELRECIPNVPADT 121

  Fly   143 KLSKIEILKLAICYIAYLNHVLETPXDSAGASSF 176
            |||||:.|:||..|||||..:|:....:....:|
Zfish   122 KLSKIKTLRLATSYIAYLMDILDKDEQNGETEAF 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 27/56 (48%)
hand2NP_571701.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..103 6/26 (23%)
HLH 88..139 CDD:278439 24/50 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..194
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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