DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and mespaa

DIOPT Version :9

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_571626.1 Gene:mespaa / 58069 ZFINID:ZDB-GENE-000406-8 Length:223 Species:Danio rerio


Alignment Length:169 Identity:45/169 - (26%)
Similarity:65/169 - (38%) Gaps:45/169 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PHLVNEDYAA------------STTLDIDKRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLD 87
            |...|:.:|.            |.|..||       :|..:     ||..:..|:.....|...|
Zfish    18 PDSQNQSFAVSDAGYYSATGSLSPTSSID-------SCSFS-----PPAYSLLPQIFPKSIQKTD 70

  Fly    88 --PSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLP--TLPPDKKLSKIE 148
              |.:..|     |.:.:...:|.:|| :.||::|:.....:...||..||  ..|..|.|:|||
Zfish    71 VQPPKRTG-----RPKSKFPGVKRQTA-SEREKLRMRDLTKALHHLRTFLPASVAPVGKTLTKIE 129

  Fly   149 ILKLAICYIAYLNHVLETPXD-----------SAGASSF 176
            .|:|||.||:.|:..|... |           |..||.|
Zfish   130 TLRLAIQYISCLSDQLGCGEDVEICEAQDEVISTSASVF 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 23/58 (40%)
mespaaNP_571626.1 HLH 88..141 CDD:278439 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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