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Protein Alignment HLH4C and mespaa
DIOPT Version :9
Sequence 1: | NP_001259243.1 |
Gene: | HLH4C / 31397 |
FlyBaseID: | FBgn0011277 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571626.1 |
Gene: | mespaa / 58069 |
ZFINID: | ZDB-GENE-000406-8 |
Length: | 223 |
Species: | Danio rerio |
Alignment Length: | 169 |
Identity: | 45/169 - (26%) |
Similarity: | 65/169 - (38%) |
Gaps: | 45/169 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 PHLVNEDYAA------------STTLDIDKRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLD 87
|...|:.:|. |.|..|| :|..: ||..:..|:.....|...|
Zfish 18 PDSQNQSFAVSDAGYYSATGSLSPTSSID-------SCSFS-----PPAYSLLPQIFPKSIQKTD 70
Fly 88 --PSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLP--TLPPDKKLSKIE 148
|.:..| |.:.:...:|.:|| :.||::|:.....:...||..|| ..|..|.|:|||
Zfish 71 VQPPKRTG-----RPKSKFPGVKRQTA-SEREKLRMRDLTKALHHLRTFLPASVAPVGKTLTKIE 129
Fly 149 ILKLAICYIAYLNHVLETPXD-----------SAGASSF 176
.|:|||.||:.|:..|... | |..||.|
Zfish 130 TLRLAIQYISCLSDQLGCGEDVEICEAQDEVISTSASVF 168
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH4C | NP_001259243.1 |
HLH |
108..165 |
CDD:238036 |
23/58 (40%) |
mespaa | NP_571626.1 |
HLH |
88..141 |
CDD:278439 |
22/53 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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