DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and Ascl3

DIOPT Version :9

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_064435.1 Gene:Ascl3 / 56787 MGIID:1928820 Length:174 Species:Mus musculus


Alignment Length:191 Identity:52/191 - (27%)
Similarity:72/191 - (37%) Gaps:57/191 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPQSIS---------LSR-YYLVDDDEMIG----PNNPHLVNEDYA--------ASTTLDIDKRF 54
            ||..:|         ||| :||   |.|:.    |..|  |...|.        :|.||.::   
Mouse     9 PPDRLSVFAESAHLPLSRPFYL---DPMVTVHLCPETP--VPASYTDELPLLPFSSDTLIMN--- 65

  Fly    55 QARMACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERI 119
                   ....|.|.|.|.|....|.....: .|:.:        |:|..           |||.
Mouse    66 -------NYGDPYPFPFPMPYTNYRRCDYTY-GPAFI--------RKRNE-----------RERQ 103

  Fly   120 RVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLETPXDSAGASSFATSC 180
            ||:..|..:|.||:.||....:|:|||:|.|:.||.||:||..:|... .....:....||
Mouse   104 RVKCVNEGYARLRRHLPEDYLEKRLSKVETLRAAIKYISYLQSLLYPDESETKKNPRTASC 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 23/56 (41%)
Ascl3NP_064435.1 HLH 95..145 CDD:278439 24/60 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 153..174 2/12 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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