DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH4C and figla

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001016342.1 Gene:figla / 549096 XenbaseID:XB-GENE-966403 Length:203 Species:Xenopus tropicalis


Alignment Length:113 Identity:36/113 - (31%)
Similarity:54/113 - (47%) Gaps:28/113 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 PPP-----------TPAP------RRRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRE 117
            |||           ||.|      :.:..|..|....|    :.||...||:|      |:| :|
 Frog    14 PPPELLGEVLREHYTPLPYMASINKMKRLPSGHYFCME----NFEEVLERRQA------ANA-KE 67

  Fly   118 RIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165
            |.|:...|..|::|:.::|.:|.|:|.||::.||.|..||..|:.:||
 Frog    68 RERIRNINSGFSKLKTIVPLIPKDRKPSKVDTLKAATEYIRLLHDILE 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 21/59 (36%)
figlaNP_001016342.1 bHLH_TS_FIGLA 60..115 CDD:381428 22/61 (36%)

Return to query results.
Submit another query.