Protein Alignment HLH4C and Atoh8

DIOPT Version :10

• Sequence 1: NP_001259243.1
• Gene: HLH4C / 31397
• FlyBaseID: FBgn0011277
• Length: 191
• Species: Drosophila melanogaster
• Sequence 2: NP_001102711.1
• Gene: Atoh8 / 500200
• RGDID: 1561512
• Length: 322
• Species: Rattus norvegicus
• Alignment Length: 200
• Identity: 50/200 - (25%)
• Similarity: 74/200 - (37%)
• Gaps: 54/200 - (27%)

  Fly    12 PPQSISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDIDKRFQAR----MACETAAQPAP---- 68
            ||.|.||:            |.:|.:.            ..|.||.    :.|...|:|.|
  Rat   129 PPASQSLA------------PGDPEVQ------------PLREQALRPRILLCAPPARPTPSAPL 169

  Fly    69 -PP------PPTPAPRRRT-----TPIAHLDPSELVGLSREERRRRRRATLKYRTAHA------- 114
             ||      |..|||..|.     :.|:|:..:.....|...|:|...||.......|
  Rat   170 APPAVPQESPVRPAPPTRPGESSYSSISHVIYNNHPDSSASPRKRPGEATAASTEIKALQQTRRL 234

  Fly   115 ---TRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLETPXDSAGASSF 176
               .|||.||...:.:|..|||.:|.....:||||:.||::|..||..|..:.:.. .:..::..
  Rat   235 LANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSADHSNLS 299

  Fly   177 ATSCL 181
            .:.|:
  Rat   300 FSECV 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH4C	NP_001259243.1	bHLH_TS_HEN1	105..165	CDD:381544	23/69 (33%)
Atoh8	NP_001102711.1	PRK12323	<50..>185	CDD:481241	19/79 (24%)
		bHLH_TS_ATOH8	225..292	CDD:381427	21/66 (32%)