DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and olig3

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001008191.1 Gene:olig3 / 493553 XenbaseID:XB-GENE-919789 Length:263 Species:Xenopus tropicalis


Alignment Length:79 Identity:27/79 - (34%)
Similarity:37/79 - (46%) Gaps:8/79 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RERIRVEAFNVSFAELRKLLPTL--PPDKKLSKIEILKLAICYIAYLNHVLETPXDSAGA----- 173
            |||.|:...|::...||:::|..  |..:|||||..|.||..||..|...||......|.     
 Frog    86 RERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGH 150

  Fly   174 -SSFATSCLFNEAN 186
             |:|....:.:.||
 Frog   151 HSAFHCGTVGHSAN 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 20/50 (40%)
olig3NP_001008191.1 bHLH_SF 64..144 CDD:469605 22/57 (39%)

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