DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and Fer3

DIOPT Version :9

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster


Alignment Length:178 Identity:55/178 - (30%)
Similarity:81/178 - (45%) Gaps:32/178 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NPHLVNEDYAASTTLDIDKRFQARMACETAAQPAPPPPPTPA---------------PRRRTTPI 83
            :||.:::     .|...|..||...     .|.|||||..|.               .|.:.||:
  Fly     3 HPHPIDQ-----PTYMPDVPFQPLW-----GQEAPPPPIVPYQELIAGFPCTDLSLWQRSQVTPL 57

  Fly    84 AHLDPS---ELVGLSREERRRRRR-ATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKL 144
            ....||   ...|.|...::.||| |::..|.|...|||.|:...|.:|.:||:.:||...:|:|
  Fly    58 VPQRPSTNGRANGSSSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRL 122

  Fly   145 SKIEILKLAICYIAYLNHVLE-TPXDSAGASSFATSCLFNEANFFAPP 191
            |:||.|:|||.||.::..:|. || :|..:.|.....:  ..:..|||
  Fly   123 SRIETLRLAITYIGFMAELLSGTPSNSHKSRSDVYGSM--NGHHQAPP 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 23/56 (41%)
Fer3NP_524322.1 HLH 87..135 CDD:278439 21/47 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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