Protein Alignment HLH4C and Ferd3l

DIOPT Version :9

• Sequence 1: NP_001259243.1
• Gene: HLH4C / 31397
• FlyBaseID: FBgn0011277
• Length: 191
• Species: Drosophila melanogaster
• Sequence 2: NP_001102450.1
• Gene: Ferd3l / 366598
• RGDID: 1311812
• Length: 166
• Species: Rattus norvegicus
• Alignment Length: 184
• Identity: 47/184 - (25%)
• Similarity: 73/184 - (39%)
• Gaps: 50/184 - (27%)

  Fly     8 MAAGPPQSISLSRYYLVDDDEMIGPNNPHLVN-------EDYA-----ASTTLDIDKRFQARMAC 60
            |||.|...:..:....|.|..:..|.:|.|..       ||..     ....|..:.|:|.....
  Rat     1 MAAYPESCLDANVLNFVADLSLASPRHPFLCEFPPGVPFEDQTLGFREGRGLLQFEGRYQEVEGG 65

  Fly    61 ETAAQPAPPPPPTPAPRRRTTPIAHLDPSE-------------LVGLSREERRRRRRATLKYRTA 112
            |                     :.:.||.|             |:|    ..:|:|..|...|.|
  Rat    66 E---------------------VDYEDPEEEEEEGEGRGRVASLLG----RPKRKRVITYAQRQA 105

  Fly   113 HATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLET 166
            ...|||.|:...|.:|.:||:.:||...:|:||:||.|:|||.||:::..:|::
  Rat   106 ANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLQS 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH4C	NP_001259243.1	HLH	108..165	CDD:238036	23/56 (41%)
Ferd3l	NP_001102450.1	HLH	102..154	CDD:278439	23/51 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810