DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and amos

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_477446.1 Gene:amos / 35110 FlyBaseID:FBgn0003270 Length:198 Species:Drosophila melanogaster


Alignment Length:81 Identity:30/81 - (37%)
Similarity:45/81 - (55%) Gaps:7/81 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 TTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKL 144
            :|..|....|...|...|..::||.|      |:| |||.|:.:.|.:|.:||.::|:|..|::|
  Fly   117 STSSASSSSSSSAGFGGEVLKKRRLA------ANA-RERRRMNSLNDAFDKLRDVVPSLGHDRRL 174

  Fly   145 SKIEILKLAICYIAYL 160
            ||.|.|::|..||..|
  Fly   175 SKYETLQMAQAYIGDL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 23/56 (41%)
amosNP_477446.1 bHLH_TS_amos_like 132..195 CDD:381558 26/66 (39%)

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