DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and CG33557

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:102 Identity:37/102 - (36%)
Similarity:49/102 - (48%) Gaps:17/102 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYI 157
            |...:...|||....|..    .|||.|....|.::..||.|:||.|.::|||||||::||..||
  Fly    50 GQENQGNHRRRPPRQKIN----ARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYI 110

  Fly   158 AYLNHVLET----------PXDSAGAS---SFATSCL 181
            .:|:..|||          ..:|.|.:   |..|.||
  Fly   111 THLSSTLETGTECQPCLLHKYESEGITRRISICTFCL 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 24/59 (41%)
CG33557NP_001014730.1 bHLH_TS_scleraxis_like 63..117 CDD:381471 24/57 (42%)

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