Protein Alignment HLH4C and Msc

DIOPT Version :9

• Sequence 1: NP_001259243.1
• Gene: HLH4C / 31397
• FlyBaseID: FBgn0011277
• Length: 191
• Species: Drosophila melanogaster
• Sequence 2: XP_008761698.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 143
• Identity: 38/143 - (26%)
• Similarity: 56/143 - (39%)
• Gaps: 48/143 - (33%)

  Fly    66 PAPPPPPTPAPRRRTTPIAHLDPSE----------------LVGLSREERRRRRRAT-------- 106
            ||...||...|.|     ::..||:                .||.:...:|:|.|..
  Rat    24 PASKRPPLLRPER-----SYASPSDNSSAEEEDPDGEEEPGTVGAAGGCKRKRPRGADASGAGGG 83

  Fly   107 -------------------LKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKL 152
                               ...|.|...|||.|:...:.:|:.|:..||.:|||.||||::.|:|
  Rat    84 AGSTGKKALPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRL 148

  Fly   153 AICYIAYLNHVLE 165
            |..|||:|..:|:
  Rat   149 ASSYIAHLRQLLQ 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH4C	NP_001259243.1	HLH	108..165	CDD:238036	24/56 (43%)
Msc	XP_008761698.1	bHLH_TS_musculin	102..167	CDD:381546	25/60 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	66	1.000	Inparanoid score	I5257
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.860