DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and twist2

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001005956.1 Gene:twist2 / 30395 ZFINID:ZDB-GENE-980526-235 Length:163 Species:Danio rerio


Alignment Length:115 Identity:43/115 - (37%)
Similarity:59/115 - (51%) Gaps:20/115 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 KRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATR 116
            ||.|.|.:.|.::.      |:...:|...|    .||..  .|.||.:.:       |.....|
Zfish    32 KRRQGRKSSEDSSS------PSSVNKRNKKP----SPSST--QSFEELQNQ-------RVLANVR 77

  Fly   117 ERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLET 166
            ||.|.::.|.:||.|||::||||.| |||||:.||||..||.:|..||::
Zfish    78 ERQRTQSLNEAFASLRKIIPTLPSD-KLSKIQTLKLASRYIDFLCQVLQS 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 29/59 (49%)
twist2NP_001005956.1 bHLH_TS_TWIST1 59..135 CDD:381418 34/78 (44%)

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