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Protein Alignment HLH4C and Mesp2
DIOPT Version :9
Sequence 1: | NP_001259243.1 |
Gene: | HLH4C / 31397 |
FlyBaseID: | FBgn0011277 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099743.1 |
Gene: | Mesp2 / 293046 |
RGDID: | 1305959 |
Length: | 368 |
Species: | Rattus norvegicus |
Alignment Length: | 131 |
Identity: | 38/131 - (29%) |
Similarity: | 57/131 - (43%) |
Gaps: | 19/131 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 ACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIRVEA 123
:|...|...|.....||...|.|.:|...| ||.|.......|.:.:.||::|:..
Rat 42 SCPCYATRPPSQSTGPARSARNTQVAPNAP----------RRARPAPAGGQRQSASEREKLRMRT 96
Fly 124 FNVSFAELRKLLP--TLPPDKKLSKIEILKLAICYIAYLNHVLETPXDS-------AGASSFATS 179
...:..|||:.|| ..|..:.|:|||.|:|||.||.:|:.:|... || :..::|:..
Rat 97 LARALQELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSALLGLSEDSLRRRRRRSADAAFSHR 161
Fly 180 C 180
|
Rat 162 C 162
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH4C | NP_001259243.1 |
HLH |
108..165 |
CDD:238036 |
21/58 (36%) |
Mesp2 | NP_001099743.1 |
HLH |
82..135 |
CDD:278439 |
20/52 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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