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Protein Alignment HLH4C and Fer1
DIOPT Version :9
Sequence 1: | NP_001259243.1 |
Gene: | HLH4C / 31397 |
FlyBaseID: | FBgn0011277 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001262334.1 |
Gene: | Fer1 / 2768661 |
FlyBaseID: | FBgn0037475 |
Length: | 256 |
Species: | Drosophila melanogaster |
Alignment Length: | 153 |
Identity: | 44/153 - (28%) |
Similarity: | 70/153 - (45%) |
Gaps: | 38/153 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 SISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDIDKRFQARMACETAAQPAPPPPPTPAPRRR 79
|.|.|.|:..|: ::....:||.|.|:..:.|:....:..| |..||.
Fly 27 STSSSDYFFGDE------HSSESDDEDDAYSSGFNSDQENTEKTFC-------------PFSRRS 72
Fly 80 TTPIAHLDPSELVGLSREERRRRRRAT--LKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDK 142
..| ||.:.|: .:.|.|...|||.|:::.|.:|..||..:||||.:|
Fly 73 HKP-----------------RRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEK 120
Fly 143 KLSKIEILKLAICYIAYLNHVLE 165
:|||::.|||||.||.:|:.:::
Fly 121 RLSKVDTLKLAISYITFLSEMVK 143
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH4C | NP_001259243.1 |
HLH |
108..165 |
CDD:238036 |
26/56 (46%) |
Fer1 | NP_001262334.1 |
HLH |
92..144 |
CDD:197674 |
24/52 (46%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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