DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and FERD3L

DIOPT Version :9

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_690862.1 Gene:FERD3L / 222894 HGNCID:16660 Length:166 Species:Homo sapiens


Alignment Length:182 Identity:51/182 - (28%)
Similarity:72/182 - (39%) Gaps:46/182 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MAAGPPQSISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDIDKRFQARMACETAAQPAPPPPP 72
            |||.|...:..:....|.|..:..|..|.|.  |:|...:|.                     .|
Human     1 MAAYPESCVDTTVLDFVADLSLASPRRPLLC--DFAPGVSLG---------------------DP 42

  Fly    73 TPAPR----RRTTPIAHLDPSELV-------GLSREER------------RRRRRATLKYRTAHA 114
            ..|.|    ||.......||.|..       |...||.            :|:|..|...|.|..
Human    43 ALALREGRPRRMARFEEGDPEEEECEVDQGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAAN 107

  Fly   115 TRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLET 166
            .|||.|:...|.:|.:||:.:||...:|:||:||.|:|||.||:::..:||:
Human   108 IRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLES 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 23/56 (41%)
FERD3LNP_690862.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..88 6/30 (20%)
bHLH_TS_FERD3L_NATO3 94..157 CDD:381421 26/62 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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