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Protein Alignment HLH4C and lin-32
DIOPT Version :9
Sequence 1: | NP_001259243.1 |
Gene: | HLH4C / 31397 |
FlyBaseID: | FBgn0011277 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_508410.2 |
Gene: | lin-32 / 191703 |
WormBaseID: | WBGene00003018 |
Length: | 142 |
Species: | Caenorhabditis elegans |
Alignment Length: | 102 |
Identity: | 36/102 - (35%) |
Similarity: | 56/102 - (54%) |
Gaps: | 16/102 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 TTPIA----HLD----PSELV-GLSREERRRRRR------ATLKYRTAHAT-RERIRVEAFNVSF 128
|||:. .|| |..|. |..::::::.|| ..|:.|.:.|. |||.|:...||::
Worm 28 TTPLQSPNFSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLRMRRSAANERERRRMNTLNVAY 92
Fly 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165
.|||::||.:...|||||.|.|::|..||..|:.:|:
Worm 93 DELREVLPEIDSGKKLSKFETLQMAQKYIECLSQILK 129
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH4C | NP_001259243.1 |
HLH |
108..165 |
CDD:238036 |
24/57 (42%) |
lin-32 | NP_508410.2 |
HLH |
73..124 |
CDD:278439 |
23/50 (46%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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