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Protein Alignment HLH4C and hlh-10
DIOPT Version :9
Sequence 1: | NP_001259243.1 |
Gene: | HLH4C / 31397 |
FlyBaseID: | FBgn0011277 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_505401.2 |
Gene: | hlh-10 / 191402 |
WormBaseID: | WBGene00001954 |
Length: | 202 |
Species: | Caenorhabditis elegans |
Alignment Length: | 135 |
Identity: | 42/135 - (31%) |
Similarity: | 68/135 - (50%) |
Gaps: | 20/135 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 NNPHLVNEDYAASTTL--DIDKRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLS 95
:.|.|..::...:.|. |:.|:.::.:..|..:.|: ||...||||: ...:| ..:||
Worm 61 SQPQLTQDEPPENDTKENDLVKQNKSEVNDENESTPS----PTQNSRRRTS-TGKID-RRMVG-- 117
Fly 96 REERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYIAYL 160
:..|.:|. |:| |||.||:..:..|.:||..|| :..|.|:||:..||:|..||.||
Worm 118 -------KMCTRRYE-ANA-RERNRVQQLSKMFDQLRVCLP-IEDDAKISKLATLKVASSYIGYL 172
Fly 161 NHVLE 165
..:|:
Worm 173 GAILQ 177
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH4C | NP_001259243.1 |
HLH |
108..165 |
CDD:238036 |
24/56 (43%) |
hlh-10 | NP_505401.2 |
bHLH_SF |
121..179 |
CDD:381792 |
26/60 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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