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Protein Alignment HLH4C and hlh-3
DIOPT Version :9
Sequence 1: | NP_001259243.1 |
Gene: | HLH4C / 31397 |
FlyBaseID: | FBgn0011277 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_495938.4 |
Gene: | hlh-3 / 174447 |
WormBaseID: | WBGene00001950 |
Length: | 170 |
Species: | Caenorhabditis elegans |
Alignment Length: | 130 |
Identity: | 34/130 - (26%) |
Similarity: | 53/130 - (40%) |
Gaps: | 31/130 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 TAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNV 126
||:..:.|...|..| .|....::::.:::|.. |||.||:..|.
Worm 2 TASTSSTPSTSTKIP-----------SSSKSSVTKQTKQKRNE-----------RERKRVDQVNQ 44
Fly 127 SFAELRKLLPTLPPDK-KLSKIEILKLAICYIAYLNHVLETPXDSAGASSFATSCLFNEANFFAP 190
.|..|::.:|....:| ||||:|.|:.|..||..|...| ...::||..|. .|:|..|
Worm 45 GFVLLQERVPKAAGNKAKLSKVETLREAARYIQELQKQL-----GMSSTSFHNSM---PADFPTP 101
Fly 191 190
Worm 102 101
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH4C | NP_001259243.1 |
HLH |
108..165 |
CDD:238036 |
20/57 (35%) |
hlh-3 | NP_495938.4 |
HLH |
32..83 |
CDD:197674 |
20/61 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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