DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and MESP2

DIOPT Version :9

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001035047.1 Gene:MESP2 / 145873 HGNCID:29659 Length:397 Species:Homo sapiens


Alignment Length:127 Identity:38/127 - (29%)
Similarity:54/127 - (42%) Gaps:29/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CETAAQPAPPPPPTPAPR----RRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIR 120
            |:.|.....|.||:.:.|    ..|||                ||.|.......|.:.:.||::|
Human    45 CDGARGLPQPQPPSCSSRAAEAAATTP----------------RRARTGPAGGQRQSASEREKLR 93

  Fly   121 VEAFNVSFAELRKLLP--TLPPDKKLSKIEILKLAICYIAYLNHVLETPXDSAGASSFATSC 180
            :.....:..|||:.||  ..|..:.|:|||.|:|||.||.:|:.||       |.|..:..|
Human    94 MRTLARALHELRRFLPPSLAPAGQSLTKIETLRLAIRYIGHLSAVL-------GLSEESLQC 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 22/58 (38%)
MESP2NP_001035047.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..92 15/62 (24%)
HLH 82..135 CDD:278439 20/52 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..208
13 X 2 AA tandem repeats of G-Q 179..204
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..295
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..376
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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