DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH4C and Twist2

DIOPT Version :10

Sequence 1:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_031881.1 Gene:Twist2 / 13345 MGIID:104685 Length:160 Species:Mus musculus


Alignment Length:112 Identity:43/112 - (38%)
Similarity:58/112 - (51%) Gaps:22/112 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PTPAPR-RRTTPIAHLDPSELVGLSREERRRRRRATLKYRTAHATRERIRVEAFNVSFAELRKLL 135
            |||..| ::.:|.|.         |.||.:.:       |.....|||.|.::.|.:||.|||::
Mouse    45 PTPGKRGKKGSPSAQ---------SFEELQSQ-------RILANVRERQRTQSLNEAFAALRKII 93

  Fly   136 PTLPPDKKLSKIEILKLAICYIAYLNHVLETPXDSAGASSFATSCLF 182
            ||||.| |||||:.||||..||.:|..||:    |....:..|||.:
Mouse    94 PTLPSD-KLSKIQTLKLAARYIDFLYQVLQ----SDEMDNKMTSCSY 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 29/59 (49%)
Twist2NP_031881.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 7/26 (27%)
bHLH_TS_TWIST2 51..132 CDD:381543 36/101 (36%)

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