DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12184 and CG12179

DIOPT Version :9

Sequence 1:NP_001259240.1 Gene:CG12184 / 31392 FlyBaseID:FBgn0025387 Length:987 Species:Drosophila melanogaster
Sequence 2:NP_572175.3 Gene:CG12179 / 31393 FlyBaseID:FBgn0025388 Length:1322 Species:Drosophila melanogaster


Alignment Length:1312 Identity:897/1312 - (68%)
Similarity:927/1312 - (70%) Gaps:344/1312 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSRDNRPAKLTRVHPPPGDYYISAMATDRELDRFMALSSTASSGASGSTQSCALGSVQPPGCASM 70
            |||.|:.|:.:|| ||....|||||||||||||||||||||||||||||.|||||||.|||||||
  Fly    15 GSRHNKLAESSRV-PPLAREYISAMATDRELDRFMALSSTASSGASGSTHSCALGSVPPPGCASM 78

  Fly    71 EHEARPESGHRRRTKSSDHRSPDERGEAKEQLRELSVSPPPSKHNISQFTSPKSEVTQTKPNEYT 135
            |||:||||||||||||||||||||||||||||||||||||||||.||||||||||||:|||||||
  Fly    79 EHESRPESGHRRRTKSSDHRSPDERGEAKEQLRELSVSPPPSKHKISQFTSPKSEVTKTKPNEYT 143

  Fly   136 IIPIVLASSPSFRSVAVTQTMSQSAGDIRRPIKSPQMQNKKTQTLESVHKSHKH----------- 189
            |||||||||||||||||||||||||.|||.|.||||||||||||.|||.||||.           
  Fly   144 IIPIVLASSPSFRSVAVTQTMSQSAEDIRTPTKSPQMQNKKTQTPESVLKSHKRLEWDPSADVGY 208

  Fly   190 ----------------------------------------------------------------- 189
                                                                             
  Fly   209 CKRAMSMSNISTLERSVLEDCSWRQPTQQRPEANLDGVQPLLAEEPSPMLDKPTPPLACSTFVNR 273

  Fly   190 ----------------------TKKCQCKSRRQDSKVSSCQTDI--------------------- 211
                                  .||||.|||||||:|||||||.                     
  Fly   274 SERTKSLNSGMESSLSSNKGDPRKKCQRKSRRQDSEVSSCQTDCRSSSQKESTQGSSEAKDIRGN 338

  Fly   212 ----------------------------------------------------------------- 211
                                                                             
  Fly   339 FTTEGTQCSYNRNDTEIDSIMEEEESIDRRKKDDLRISSRVQDPQISSRRPSVSSSRRESLSSYR 403

  Fly   212 ----------------------------------------------------------------- 211
                                                                             
  Fly   404 RDDSRLNSPNSSRLGSEVSSRVESSRSSSRRESQTNSVYGSLSASSFDYHMHMAQEVEVLKHNQR 468

  Fly   212 ------------------------------------HHPEREQQEIQPLMRDQRKAKQRHEKDHQ 240
                                                ||..||||||||||||||||:||||||||
  Fly   469 RQQEMEVEPKKQLEKEQHQNDMQQGEPKGRELKDKNHHSGREQQEIQPLMRDQRKAEQRHEKDHQ 533

  Fly   241 LEREQQGIQQLTRDQRKATKREKVREQERQYTAAQFEKIRGNRRHVSKENQQPENPVVNPSTGVT 305
            |||||||||||::.||||.||||.||||||||||||||||.|||||:||||:|||||||||||||
  Fly   534 LEREQQGIQQLSKGQRKAKKREKEREQERQYTAAQFEKIRSNRRHVNKENQKPENPVVNPSTGVT 598

  Fly   306 ASSSTTSLDVGSGSRPRGVLDIGIELVCSLVKSRSLSQGQKKKLVRDIARRISCLELTESSTSSR 370
            ||:|||||||||||||.|.||:||:|:||||||||||||||||||||||||||||||||||||||
  Fly   599 ASTSTTSLDVGSGSRPGGELDLGIDLLCSLVKSRSLSQGQKKKLVRDIARRISCLELTESSTSSR 663

  Fly   371 SLSSSSKEQLKVPTGSLQQVAATNTNQSNARSSSKAERIAPPVPAPRKRAAIGSSSPLPESVSYS 435
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   664 SLSSSSKEQLKVPTGSLQQVAATNTNQSNARSSSKAERIAPPVPAPRKRAAIGSSSPLPESVSYS 728

  Fly   436 GSTSGSGEVITQKTNIPNRNASTDADIEPLDLQDWLNPMTLSEIEFEERLKGGTDSERRRQLHWV 500
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   729 GSTSGSGEVITQKTNIPNRNASTDADIEPLDLQDWLNPMTLSEIEFEERLKGGTDSERRRQLHWV 793

  Fly   501 KTEINRMQEFKNLLESISLPSKSQKKANTESATAAQIPSSMRCMGDQKERPDKEYLLRQEMSAEA 565
            |||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   794 KTEINRMQEFKNLLENISLPSKSQKKANTESATAAQIPSSMRCMGDQKERPDKEYLLRQEMSAEA 858

  Fly   566 ESKEMENSETTTTPPPPVRIESVGVNVTNSDPSTLPAPPPTQPPPPPPHLNQRNLQNRKKMATPL 630
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   859 ESKEMENSETTTTPPPPVRIESVGVNVTNSDPSTLPAPPPTQPPPPPPHLNQRNLQNRKKMATPL 923

  Fly   631 LVSGSSTSGGGRSESVCSFVQQRQRQFCEHYENEQLEEFVLLQKQKLYQLRKQLNQQKDILIQRQ 695
            |||||||||||||||||||||||||||.|||:|:|.::|||||:||||||:||||||||||||||
  Fly   924 LVSGSSTSGGGRSESVCSFVQQRQRQFREHYQNQQQQQFVLLQQQKLYQLQKQLNQQKDILIQRQ 988

  Fly   696 QHCG-------QRTYVHQQHCPRRQQEAQDQHDEREQYMQMQYAQAAG-AYA-------SGAVGN 745
            ||||       |||.:|||:||||||||::|.|||||||||||||||| |||       |||..|
  Fly   989 QHCGQCAQCGHQRTCIHQQNCPRRQQEAEEQPDEREQYMQMQYAQAAGSAYATPHQSGSSGADKN 1053

  Fly   746 EAIYHQVVNPQGVASYVQATMVSTETQNEATATGGAGGSSITR---------------------- 788
            ||||:||||.||||||||||||||||||||:||||||||:|||                      
  Fly  1054 EAIYYQVVNSQGVASYVQATMVSTETQNEASATGGAGGSAITRSTTTTTNSSSSMMCISSDMSVP 1118

  Fly   789 ------CE----TTTRQYDDVACQRVRRGHKETRMNAERMQR---QVRPRAISYVIQFTPTGSSE 840
                  ||    |||.|||||||||||||||||.||||.|||   ||||||||||||||||||||
  Fly  1119 MGMMNTCETTTTTTTHQYDDVACQRVRRGHKETTMNAESMQRQTLQVRPRAISYVIQFTPTGSSE 1183

  Fly   841 VIEKPPSLQDQLQLARPEFCANAKQRKAILNEMQMIRNARRQELDNVLSQSTSMEALNRHLEQLP 905
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly  1184 VIEKPPSLQDQLQLARPEFCANAKQRKAILNEMQMIRNARRQELDNVLSQSTSMEALNRHLEQLP 1248

  Fly   906 PAANTRVKLFTTREMKAITSKRCKNLPEVLAAQSRQEEEQRRRSNRLMRDAFNKSHLSKQRLKSR 970
            |.|||||:||||||||||||||||||||||||||||||||||||||||||.|||      |||||
  Fly  1249 PPANTRVRLFTTREMKAITSKRCKNLPEVLAAQSRQEEEQRRRSNRLMRDVFNK------RLKSR 1307

  Fly   971 VASGNISQRGNH 982
            ||||.||.  ||
  Fly  1308 VASGQISL--NH 1317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12184NP_001259240.1 ALMS_motif 847..959 CDD:291955 108/111 (97%)
CG12179NP_572175.3 ALMS_motif 1190..1309 CDD:291955 115/124 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447251
Domainoid 1 1.000 58 1.000 Domainoid score I10748
eggNOG 1 0.900 - - E1_2E8V9
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I7409
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0019604
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.880

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