DRSC/TRiP Functional Genomics Resources

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Protein Alignment peb and rreb1a

DIOPT Version :9

Sequence 1:NP_001014722.1 Gene:peb / 31391 FlyBaseID:FBgn0003053 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_002666628.3 Gene:rreb1a / 338237 ZFINID:ZDB-GENE-030219-137 Length:1689 Species:Danio rerio


Alignment Length:2109 Identity:474/2109 - (22%)
Similarity:759/2109 - (35%) Gaps:701/2109 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SSRKR----KIRHLQLNHHQQQQHHQQSDLLSDEDVAEAEAEEDEDEEDGDQVAALGSRNLGRHK 124
            |.||:    |::.::.:..:.:.......|..:|     |||:.::                   
Zfish     2 SRRKQPNPNKVKPMENSAEEARTESANCSLTGEE-----EAEQSDE------------------- 42

  Fly   125 QRRSGGATTQASIVMDYSSGDASSLRK--KFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSAT 187
              |...|.|:|     ::.|.|....:  :::..|:.|. .|...||....|       :.:|..
Zfish    43 --RQSPAPTEA-----HTEGSAGVEEEGNEWKNGRNEAD-GEMEAVDGVDLT-------SINSMM 92

  Fly   188 NTTATSGIGASAVAPSPVGGAAINAASSSSGSSSGGSGGSSPQGQCLSSGESGIGAGDEHMKYLC 252
            ||.              :..|.:|....|:.|:.......||...  .||.....|.||.....|
Zfish    93 NTV--------------MKAAQLNGGVDSAHSTPNKVPAKSPGTN--RSGRKSQEAKDESGCIAC 141

  Fly   253 PICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHL 317
            |:|:......|:.|.|||.||..:| |.:.:|.||.|.||||||||||:|||:||||:.|..||.
Zfish   142 PLCDKGFQNQHQLTMHIRQHNTDSG-TSDHSCSICGKSLSSASSLDRHMLVHSGERPYKCTVCHQ 205

  Fly   318 TFTTNGNMHRHMRTHKQHQVAQ-----SQSQSQQQQSLQQQQQSQQQRRQQQQHQPS-------- 369
            ||||||||||||:.|::...:.     :.|.:::::|...:::..|....::..:||        
Zfish   206 TFTTNGNMHRHMKIHEKDSASSIPNSPTLSPTKRRRSSTAKRKLSQDEDCEKTEEPSSKKVLEDS 270

  Fly   370 ---QQQQNPAQQQLMGNTLSARAESYESDASCSTDVSSGHSHS-----------RSSSSLNNNNN 420
               :|..|..|.:|:..::..:..:.::|.....::   |..:           |:..||..:|.
Zfish   271 GADEQGSNKGQDELLTCSICFKNFTCKNDYDTHMEI---HPDTTLRCDLCCVSFRTPRSLLRHNA 332

  Fly   421 NSHK------------ANN-----NLKDLEELEVS------------------------------ 438
            .:||            .||     ...||..::.|                              
Zfish   333 ATHKQLPTDPSGRPFIQNNPSIPLGFNDLAFIDFSCLKFPRIAQIWCETNLRRCTGKFHRFVCDS 397

  Fly   439 ---------------TEDQDTENKQRRLKTTINNNIIESEQQEDMD---------------DEEA 473
                           ...:::...|......:..:.:.:::...||               :|:|
Zfish   398 CDKAFPLSSALDLHKASHEESSGTQETTSPLVEKDELPNDKSSFMDFLGLQHISQVKPAPSEEDA 462

  Fly   474 DDA---DVAMLTSTPDVATLLAGASASGAASRS---PTP--SPSASPAL-LLSCPACGASDFETL 529
            ..|   .:.::...|:.:|:.......|:.:.|   ||.  ..|...|| |||     ...|:| 
Zfish   463 LQAKLDSIRVIHVEPNQSTVPQEPGLVGSVNLSLVDPTTLHGLSHQEALKLLS-----LQPFQT- 521

  Fly   530 PALCVHLDAMHSDIPAKCRDCEVIFATHRQLQSHCCRLPNALAGGLPPLLGASSSPL------HN 588
             ...|..|......|. |.|.....|..:|:.......||.:|  ||||   |.:|.      :.
Zfish   522 -GFLVQPDGGMVVKPV-CGDTSTELADIQQILKVASAAPNQIA--LPPL---SKAPCSTGQSGYK 579

  Fly   589 EEPEDEEHGDDEDLEQKERLASQSEDFFH---QLYLKHKTANGCGAISHPPSPIKHEPADTKDLA 650
            :.|         .|:.|..:|.::.....   .|....:.:.||.:.|.|| |..|.....::  
Zfish   580 QMP---------PLKPKPLVAPRTSMVASTPPPLLNTQQASLGCISPSLPP-PASHPIKVARE-- 632

  Fly   651 DIQSILNMTSSSSSFLRNFEQS------------VNTPNSSQYSLDGRD-QEEEAQDAFTSEFRR 702
                  |.:|||||...|...:            .:||    ..:|.|. ::|.::...|:..:.
Zfish   633 ------NSSSSSSSSASNQASAERIQMEAECMGDAHTP----MDMDERHIKQENSKLEETTGKKG 687

  Fly   703 MKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDR 767
            ...:|.:||:.|..||.....|:.|.|.|||.:    |.:||:|.|...|||.|:||:|||:|:|
Zfish   688 TSQKGSYPCRFCDQVFAFSGVLQAHMRYHLGVL----PHQCNICDYVAPDKATLIRHLRTHSGER 748

  Fly   768 PYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVY--------HPAEDAGCEDSKSRL-GE 823
            ||.|.:|.|.||.|||||||||.:|.|:||:|:::.|.|        ...|.||..::..|. ||
Zfish   749 PYVCRLCLYPFTVKANCERHLRKKHMKSSRKEIEKNIKYVTSSTSTSDVVEQAGTSETTCRFCGE 813

  Fly   824 DLADTSFRSISPTPPPPPVNESKSQLKHMLLGENHLAPVN--QQPPLKIQVKSLDQLVDKKPSAP 886
            ||  .:||::                      :.||...|  |:.|.:.:......|..:.....
Zfish   814 DL--KTFRAL----------------------QIHLRTHNGCQRKPFECKRCGAAFLAKRNCIHH 854

  Fly   887 APQQQQQQQQQEKSGSALDFSMDVLDLSKKPTGGASLTPAVTRTPTPAAVAPVTPGGVGTPDLAA 951
            ..:|..:.|:|       |....::.|         |.|:...:|:|:.:     .||.|.::..
Zfish   855 LLKQHPEVQEQ-------DIEDHIITL---------LAPSSQNSPSPSPL-----NGVPTNNVVQ 898

  Fly   952 AIEQQQLLLAQQQLFGAGGEYMQQLFRSLMFQSQTSGFPFFPFMAPPPPQANPEKPPMV--SPPN 1014
            .|:.:.|..           |...:.:.|.|.:::.|             ||......|  ||..
Zfish   899 PIKVEDLSF-----------YTVDMDQPLDFSNKSRG-------------ANNNNAGSVSGSPAI 939

  Fly  1015 RINPM-------PVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRS 1072
            :|.|:       |:.:.:     |..|:|          |.||                  .:.:
Zfish   940 KIEPVSFDSSMEPIDLSI-----PKNPMK----------KLKQ------------------DIEA 971

  Fly  1073 NMERHVKQQHPQFYAQRQRSGHHVMRGRGASNVAAAAAAAAAAAAATVMAGGPGSSGFGSNHHHG 1137
            .:.|.||::                                           |.|          
Zfish   972 ALPRAVKKE-------------------------------------------PSS---------- 983

  Fly  1138 HGHGSHGSHGHAPISEQVKCAILAQQLKAHKNTDLLQQALA-----------HGSSSVAGNPLLH 1191
                               .:|||:.|:|.|:.|...|.|.           .||:|.||.||..
Zfish   984 -------------------VSILAKALQADKSIDEKCQPLGCYQVPVALTSLTGSTSAAGRPLRL 1029

  Fly  1192 FGYPLTNPSPMHNGSSQ-----GNGQATAMDDDEPKLIIDEDENEHDHEVEAEDVDDFEEDEDEE 1251
              .||. |.|...|..:     ...|..:.....|.|:..::.|....:::.             
Zfish  1030 --KPLL-PKPSSAGVKELPPLASIAQIISSVSGAPDLLKRDNTNSLKTDIDT------------- 1078

  Fly  1252 EMDEPEDEPELILDEQPAEKEAEEEQELPKPLEQLGTKEAAQKMAETILEQAIKAGKPLSPPPTK 1316
                            ||      :||.|:.|::..:.|.::|.                   |:
Zfish  1079 ----------------PA------KQESPETLKEELSVEISKKR-------------------TR 1102

  Fly  1317 ENASPANPTVATTMQEPAITAPSTNPSSLKTMIAQAEYVGKSLKEVASSPFKDESQDLVPVAKLV 1381
            :..|.......|.|..|.::..                             .:.|.:...|.:::
Zfish  1103 KRPSNGIAKEKTVMNAPDLSID-----------------------------LESSGEFASVERML 1138

  Fly  1382 DNATSQNMGFNSYFRPSDV------------ANHMEQSDEEGLVASGSASESNNSGTEDVTSSSS 1434
            .|..:..  |::|.:.:.:            .:..|..||:.|....:..:|..           
Zfish  1139 ANTDANK--FSAYLQTNTIELARKGRQQPGAGDEKEMKDEKHLPVQQTVQQSKG----------- 1190

  Fly  1435 SSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLL 1499
                 ||:|||.:..::.||:|.|:|||:|||:||:||||||||:.|..|...|:|||||:||||
Zfish  1191 -----KKNAYSNSVQKMICPFCPRVFPWASSLQRHMLTHTGQKPYPCPQCDAFFSTKSNCERHLL 1250

  Fly  1500 RKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAE-------------REKELELE 1551
            ||||.....:.       .:..||.||..|:...|......|||             .||.:..:
Zfish  1251 RKHGISNRVLR-------RNGVIPKPKDAEDGSPESADSTSEAELPMGEAMDLTSSDPEKSVASD 1308

  Fly  1552 RER-----------------ELERERELERERQLEKEKERERQQLIQKLAAQMNAAATA-AAVVA 1598
            .|:                 :.:.:..||..:..:.|.|.:          .:|:..|. ...|:
Zfish  1309 AEKPSPAKPTEAAVVEPLPQKEDDKTSLESLKHNDTEIEDD----------HLNSNKTLDLTFVS 1363

  Fly  1599 AASAVNGGASGGPH-GPIAD------ALAGGDLPYKCHLCEGSFAERLQCLEHIKQAHAHEYALL 1656
            .|..||......|. .|:||      |.|..:....|.:|:.||       .::|....||.|..
Zfish  1364 KAKDVNITEKEQPQSSPVADEEISDKAKAHEESKLTCKICKKSF-------RYVKTLTRHEKAHQ 1421

  Fly  1657 L-------------------------------------AKGAIETES----LEANPHQQPSQQAV 1680
            |                                     .||..|||.    :|:.|.:...::  
Zfish  1422 LDMTQDAGVTNGQNLTKSDDPIVPCEKKEVTEEEVESVRKGKAETEGNGSVVESGPDEDKEER-- 1484

  Fly  1681 HSDDEAP-----NGGGNRGKYPDYSNRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCDICLRK 1740
             ||:|.|     :.|...|..||  .||.:|:.|.:||||.:||.||||:|:||||::|..|.|.
Zfish  1485 -SDEEEPATEPKSAGREPGSKPD--KRKKVCSICNKRFWSLQDLTRHMRSHTGERPYKCQTCERT 1546

  Fly  1741 FTLKHSMLRHMKKHSGRAHNGDTPGSDC-----SDDEQVSSPPSTPHPTQPTSANNNNSCHNNNN 1800
            ||||||::||.:.|. :....|:.||.|     :|:|..|...::.....|||.|..:  .|.:.
Zfish  1547 FTLKHSLVRHQRIHQ-KLRGVDSDGSTCGAAGGADEEGFSGRSASESECTPTSTNPPS--ENESE 1608

  Fly  1801 NANNNNNNNNNNNNNNSSSKLGLKLHDLLDKASEWRASRLGEHKENMGEATPSGATVAGSD--LI 1863
            ..:.......:..|..:::           .|.|:..|...|......:.||:..:.|.|:  .|
Zfish  1609 MTDTVKGEPTSYVNKGAAA-----------DAEEYNLSSETEPAAETPKETPAEDSPATSEPGFI 1662

  Fly  1864 GNLLGISDQGILNKLLSSADEAAKLLGVD 1892
            ..||.|..:.....:|.:::.|  ||||:
Zfish  1663 QGLLEIHTKPTTEHILPTSEPA--LLGVE 1689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pebNP_001014722.1 C2H2 Zn finger 252..272 CDD:275368 8/19 (42%)
C2H2 Zn finger 284..304 CDD:275368 15/19 (79%)
zf-H2C2_2 296..321 CDD:290200 17/24 (71%)
C2H2 Zn finger 312..332 CDD:275368 15/19 (79%)
C2H2 Zn finger 711..731 CDD:275368 7/19 (37%)
C2H2 Zn finger 743..763 CDD:275368 11/19 (58%)
zf-H2C2_2 755..780 CDD:290200 14/24 (58%)
C2H2 Zn finger 771..789 CDD:275368 12/17 (71%)
C2H2 Zn finger 1061..1079 CDD:275368 1/17 (6%)
PopZ 1299..>1430 CDD:226348 15/142 (11%)
C2H2 Zn finger 1453..1473 CDD:275370 13/19 (68%)
zf-H2C2_2 1465..1490 CDD:290200 15/24 (63%)
C2H2 Zn finger 1481..1502 CDD:275370 13/20 (65%)
C2H2 Zn finger 1706..1726 CDD:275368 12/19 (63%)
zf-H2C2_2 1718..1742 CDD:290200 14/23 (61%)
C2H2 Zn finger 1734..1754 CDD:275368 11/19 (58%)
rreb1aXP_002666628.3 C2H2 Zn finger 838..859 CDD:275368 1/20 (5%)
COG5048 1182..1562 CDD:227381 125/425 (29%)
C2H2 Zn finger 1204..1224 CDD:275368 13/19 (68%)
zf-H2C2_2 1216..1241 CDD:290200 15/24 (63%)
C2H2 Zn finger 1232..1253 CDD:275368 13/20 (65%)
C2H2 Zn finger 1512..1532 CDD:275368 12/19 (63%)
zf-H2C2_2 1524..1548 CDD:290200 14/23 (61%)
zf-C2H2 1538..1560 CDD:278523 11/21 (52%)
C2H2 Zn finger 1540..1560 CDD:275368 11/19 (58%)
COG5048 <100..327 CDD:227381 71/232 (31%)
C2H2 Zn finger 141..161 CDD:275368 8/19 (42%)
zf-C2H2 170..192 CDD:278523 15/21 (71%)
C2H2 Zn finger 172..192 CDD:275368 15/19 (79%)
zf-H2C2_2 184..209 CDD:290200 17/24 (71%)
C2H2 Zn finger 200..220 CDD:275368 15/19 (79%)
C2H2 Zn finger 314..330 CDD:275368 3/15 (20%)
C2H2 Zn finger 395..415 CDD:275368 0/19 (0%)
C2H2 Zn finger 696..716 CDD:275368 7/19 (37%)
C2H2 Zn finger 724..744 CDD:275368 11/19 (58%)
zf-H2C2_2 737..760 CDD:290200 13/22 (59%)
C2H2 Zn finger 752..770 CDD:275368 12/17 (71%)
C2H2 Zn finger 808..828 CDD:275368 9/43 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595191
Domainoid 1 1.000 46 1.000 Domainoid score I12118
eggNOG 1 0.900 - - E33208_3BETZ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 347 1.000 Inparanoid score I2273
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D24048at33208
OrthoFinder 1 1.000 - - FOG0007124
OrthoInspector 1 1.000 - - otm24236
orthoMCL 1 0.900 - - OOG6_108574
Panther 1 1.100 - - LDO PTHR46451
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5213
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.850

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