DRSC/TRiP Functional Genomics Resources

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Protein Alignment peb and Rreb1

DIOPT Version :10

Sequence 1:NP_476674.3 Gene:peb / 31391 FlyBaseID:FBgn0003053 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_006253876.1 Gene:Rreb1 / 306873 RGDID:1310904 Length:1751 Species:Rattus norvegicus


Alignment Length:2069 Identity:484/2069 - (23%)
Similarity:736/2069 - (35%) Gaps:677/2069 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SGYLGNSSSATNTTATSGIGASAVAPSPVGGAAINAASSSSGSSSGGSGGSSPQGQCLSS----- 236
            :|..|:..|:.||..::.:..|:|.                      ..|.||||  :.|     
  Rat     7 TGLEGSDLSSVNTMMSAVMSISSVT----------------------ENGGSPQG--IKSPMKPP 47

  Fly   237 GESGIGAGDEHMK-----YLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASS 296
            |.:.||..::..|     |.||:||.|..|.|:.|.|||.||...|..:: :|.||.|.||||||
  Rat    48 GPNRIGRRNQETKEEKSSYNCPLCEKVCTTQHQLTMHIRQHNTDTGGADH-SCSICGKSLSSASS 111

  Fly   297 LDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQVAQSQSQSQQQQSLQQQQQSQQQRR 361
            ||||:|||:||||:.|..|..:|||||||||||:.|::.  ..|.:.:.....|::::.| .:|:
  Rat   112 LDRHMLVHSGERPYKCTVCGQSFTTNGNMHRHMKIHEKD--TNSTTAAAPPSPLKRRRLS-SKRK 173

  Fly   362 QQQQHQPSQQQQNPAQQQLMGNTLSARAESYESDASC-------------STDVSSGHSHS---- 409
            .....:..::...||::.:.....|...:..:....|             .|.:.: ||.:    
  Rat   174 LSHDAESEREDPGPAKKTVEDGQSSGLDKMADETFHCPVCFKEFVCKYGLETHMET-HSDNPLRC 237

  Fly   410 -------RSSSSLNNNNNNSHK------------ANN-----NLKDLEELEVSTEDQDTENKQRR 450
                   |:...|..:|...||            .||     ...||...:.|.. :.....|..
  Rat   238 DICCVTFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCR-KFPRISQAW 301

  Fly   451 LKTTINNNIIESEQQEDMDDEEADDADVA--MLTS--------------------------TPDV 487
            .:|.:...|  |||...:    .|..|.|  ||:|                          |.|.
  Rat   302 CETNLRRCI--SEQHRFV----CDTCDKAFPMLSSLILHRQTHIPADQGREKLQTKTLAADTLDQ 360

  Fly   488 ATLLAGASASGAASRSPTPSPSASP-------ALLLSC-----PAC----GASDFE--------- 527
            ...||...........|.|:....|       ...|.|     |.|    ..|.||         
  Rat   361 KVFLAFLGLQHTKDVKPAPAEELLPDDSHTIQLQTLKCQLPQDPGCTNVLSLSPFEAASLGGSLT 425

  Fly   528 TLPAL---CVHLDAM----------HSDIPAK--CRDCEVIFATHRQLQSHCCRLPNALAGGLPP 577
            .|||.   ..||...          .|.|..|  ..:..:..|..:|:.......|..::  |||
  Rat   426 VLPATKENMKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMAASAPPQIS--LPP 488

  Fly   578 LLGASSSPLHNEEPEDEEHGDDEDLEQKERLASQSEDFFHQLYLKHK------------------ 624
            |..|.::||                         ...|.|...||.|                  
  Rat   489 LSKAPATPL-------------------------QAIFKHMPPLKPKPLVAPRTVVAASTPPPLI 528

  Fly   625 ----TANGCGAISHPPSPIKH-----EPADTKDLADIQSILNMTSSSSSFLRNFEQSVNTPNSSQ 680
                .:.||.:.|.||..:|.     |...:..|...:|.:...:|:..||:  :..|..|  .|
  Rat   529 NAQQASPGCISPSLPPQSLKFLKGSVEAVSSAHLLQSKSGIQPNTSTQLFLQ--QPGVELP--GQ 589

  Fly   681 YSLDGRDQEEEAQDAFTSEFRRMKLRGE-------------------------FPCKLCTAVFPN 720
            ..:..:.:::...:|........|::.|                         :||:.|..||..
  Rat   590 AEMKAQLEQDSIIEALLPLNMEAKIKQEITEGDLKAIMTGPSGKKTPAMRKVLYPCRFCNQVFAF 654

  Fly   721 LRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCE 785
            ...|:.|.|.|||    ..|::||:|.|...|||||:||:|||:|:|||.|.:|:|.||.|||||
  Rat   655 SGVLRAHVRSHLG----ISPYQCNICDYIAADKAALIRHLRTHSGERPYICKICHYPFTVKANCE 715

  Fly   786 RHLRNRHGKTSREEVKRAIVY---HPAE--DAGCE-DSKSRL-GEDLADTSFRSI---------- 833
            ||||.:|.|.:|:::::.|.|   ..||  ||.|. ::..|| ||||  ..:|::          
  Rat   716 RHLRKKHLKATRKDIEKNIQYVSSSTAELVDALCSPETVCRLCGEDL--KHYRALRIHMRTHCSR 778

  Fly   834 -----SPTPPPPPVNE------SKSQLKHMLLGENHLAPVNQQPPLKIQVKSLDQLVDKKPSAPA 887
                 .....|....|      :|....|.:|.::          |.:..|.::..|....:...
  Rat   779 GLGGCHKGRKPFECKECNAAFAAKRNCIHHILKQH----------LHVPEKDIESYVLATDAGLG 833

  Fly   888 PQQQQQQQQQEKSGSALDFS-MDVLDLSKKPTGGASLTPAVTRTPTPAAVA-PVTPGGVGTPDLA 950
            |.....:....:..|.:.|: ...|....:|..| .|..:.|: |.|:.:: .:.|......|..
  Rat   834 PADTAAEASSREESSCVTFAECKPLTTFLEPQNG-FLHSSPTQ-PLPSHISVKLEPASSFATDFN 896

  Fly   951 AAIEQQQLLLAQQQLFGAGGEYMQQLFRSLMFQSQTSGFPFFPFMAP-----PPPQANPEKPPMV 1010
            ..::..|..||..|:       .|:...||:..|.:|.. :...|.|     |......:|..:|
  Rat   897 EPLDFSQKGLALVQV-------KQENMSSLLNSSSSSAL-YDCSMEPIDLSIPKSGKRGDKDTVV 953

  Fly  1011 SPPNRINPMPVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNME 1075
            |...:           .|.|..|..:.:                :..|..|.      ||...:|
  Rat   954 SSDAK-----------KPEPEAGKAEQL----------------SPHPPPCP------TLSVTVE 985

  Fly  1076 RHVKQQHPQFYAQRQRSGHHVMRGRGASNVAAAAAAAAAAAAATVMAGGPGSSGFGSNHHHGHGH 1140
            ......:|                  |..|.|...||                            
  Rat   986 PKGSLDNP------------------AGTVVAVTTAA---------------------------- 1004

  Fly  1141 GSHGSHGHAPISEQVKCAILAQQLKAHKNTDLLQQAL-----AHGSSSVAGNPLLHFGYPLTNPS 1200
                                    |...:|..||.::     .:.|:.::..|||          
  Rat  1005 ------------------------KLEPHTQPLQGSVQLAVPIYSSALISNAPLL---------- 1035

  Fly  1201 PMHNGSSQGNGQATAMDDDEPKLIIDEDENEHDHEVEAEDVDDFEEDEDEEEMDEPEDEPELILD 1265
                |||.....|:.:....||                                     |.|:| 
  Rat  1036 ----GSSALLNSASLLRPLRPK-------------------------------------PPLLL- 1058

  Fly  1266 EQPAEKEAEEEQELPKPLEQLGTKEAAQKMAETILEQAIKAGKPLSPPPTKENA----SPA---- 1322
            .:||..|     ||| ||..:....::...|.|:|:  .||..| .|..|..||    ||.    
  Rat  1059 PKPAMTE-----ELP-PLASIAQIISSVSSAPTLLK--TKAADP-GPSSTSSNAVATDSPGGSIP 1114

  Fly  1323 ----NPTVATTMQEPAITAPSTNPSSLKTMIAQAEYVGKSLKEVASSPFK--------------- 1368
                :||...:.:||...||:.                 |..|.||.|.:               
  Rat  1115 KASPSPTDIPSSREPTDPAPTA-----------------SSPEEASPPEQGPAASSRKRGRKRGM 1162

  Fly  1369 -------------DESQDLVPVAKLVDNATSQNMGFNSYFRPSDVANHMEQSDEEGLVASGSASE 1420
                         |.|.:...:.|::  ||:....|:.:.:.:      |.:.||   .:|:.::
  Rat  1163 RNRPLPNSSAVDLDSSGEFASIEKML--ATTDTNKFSPFLQTA------EDTQEE---VAGTPAD 1216

  Fly  1421 SNNSGTEDVTSSSSSSEPK----KKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKC 1481
            ......|:   ..||:|.:    |:::|:....:::||:|.|:|||:|||:||:|||||||||.|
  Rat  1217 HRGPTEEE---QGSSAEDRLLRAKRNSYANCLQKINCPHCPRVFPWASSLQRHMLTHTGQKPFPC 1278

  Fly  1482 SHCPLLFTTKSNCDRHLLRKHG-----------------------NVES---------------- 1507
            ..|...|:|||||:||.|||||                       :.:|                
  Rat  1279 QKCDAFFSTKSNCERHQLRKHGVTTCSLRRNGLIPPKEGDVGSHDSTDSQSDTDTLTTPGEVLDL 1343

  Fly  1508 -AMSVYVPT-EDVSEPIPVPKSVEEIELE-EQRRRQEAEREKELELERERELE-RERELERERQL 1568
             |.....|| |..||..|..:.:.|.|.: |....:|.|.||..|...|.||| |..|...:...
  Rat  1344 TARDKEQPTSEGASELSPATQDLTETEAKAEAAPPEEEEEEKGTEENPEPELECRVEESSGDADA 1408

  Fly  1569 EKEKERERQQLIQKLAAQMNAAATAAAVVAAASAVNGGASGGPHGPIADALAGGDLPYKCHLCEG 1633
            .:|.....|.|....|.:|.....|.   :.|.||:   |.||        |..:..:.|:.|..
  Rat  1409 PEEDTASNQSLDLDFATKMMDFKLAE---SEAGAVD---SQGP--------AQQEPKHACNTCGK 1459

  Fly  1634 SFAERLQCLEHIKQAHA------HEYALLLAK----GAIETESLEANPHQQPSQQAV-------- 1680
            :| :.|..|...::||.      .|.|..|..    .|:|..|....|.:.|::.:.        
  Rat  1460 NF-KFLSTLSRHRKAHGCQEPKEEEEAPSLENESLGRAVEGPSPSPEPEETPAESSATDPTAGTG 1523

  Fly  1681 -------HSDDEAPNGG-------GNRGKYPDYSN----------RKVICAFCLRRFWSTEDLRR 1721
                   :.|.|:|:.|       |:..:.|...:          ||.:|:.|.:||||.:||.|
  Rat  1524 EASGERQNEDTESPSDGEGTAEKRGDSDRRPKTDSPKSMASKADKRKKVCSVCNKRFWSLQDLTR 1588

  Fly  1722 HMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQVSSPPSTPHPTQP 1786
            |||:|:||||::|..|.|.||||||::||.:.|. :|.:....|.|...||:..           
  Rat  1589 HMRSHTGERPYKCQTCERTFTLKHSLVRHQRIHQ-KARHSKHHGKDSDKDERAE----------- 1641

  Fly  1787 TSANNNNSCHNNNNNANNNNNNNNNNNNN-------------NSSSKLGLKLHDLLDKASEWRAS 1838
             ..:.:.|.|:.||.|:.|...:..:.:|             ||..:.|.:...:.::|:|..|.
  Rat  1642 -EGSEDESTHSANNPASENEAESAPSTSNHVAITRSRKESLANSGKECGREEKAIAEQATEPSAP 1705

  Fly  1839 RLGEHKENMGEATPSGATVAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVD 1892
            :   ...:.||..|........||: .|.|.....|    |::.|.|::|||::
  Rat  1706 K---EPGSPGETDPQSPAAIVQDLL-ELCGTRPAPI----LAATDGASQLLGME 1751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pebNP_476674.3 C2H2 Zn finger 252..272 CDD:275368 11/19 (58%)
C2H2 Zn finger 284..304 CDD:275368 15/19 (79%)
zf-H2C2_2 296..321 CDD:463886 15/24 (63%)
C2H2 Zn finger 312..332 CDD:275368 13/19 (68%)
C2H2 Zn finger 711..731 CDD:275368 7/19 (37%)
C2H2 Zn finger 743..763 CDD:275368 12/19 (63%)
zf-H2C2_2 755..780 CDD:463886 15/24 (63%)
C2H2 Zn finger 771..789 CDD:275368 12/17 (71%)
C2H2 Zn finger 1453..1473 CDD:275370 13/19 (68%)
zf-H2C2_2 1465..1490 CDD:463886 16/24 (67%)
C2H2 Zn finger 1481..1502 CDD:275370 12/20 (60%)
C2H2 Zn finger 1706..1726 CDD:275368 12/19 (63%)
zf-H2C2_2 1718..1742 CDD:463886 14/23 (61%)
C2H2 Zn finger 1734..1754 CDD:275368 11/19 (58%)
Rreb1XP_006253876.1 COG5048 <64..246 CDD:227381 61/186 (33%)
C2H2 Zn finger 68..88 CDD:275368 11/19 (58%)
zf-C2H2 97..119 CDD:395048 15/22 (68%)
C2H2 Zn finger 99..119 CDD:275368 15/19 (79%)
zf-H2C2_2 111..136 CDD:463886 15/24 (63%)
C2H2 Zn finger 127..147 CDD:275368 13/19 (68%)
zf-C2H2_4 208..230 CDD:464025 2/22 (9%)
C2H2 Zn finger 211..230 CDD:275368 1/19 (5%)
C2H2 Zn finger 237..253 CDD:275368 2/15 (13%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
C2H2 Zn finger 645..665 CDD:275368 7/19 (37%)
zf-H2C2_5 671..695 CDD:404746 14/23 (61%)
C2H2 Zn finger 673..693 CDD:275368 12/19 (63%)
C2H2 Zn finger 701..719 CDD:275368 12/17 (71%)
C2H2 Zn finger 792..816 CDD:275368 5/33 (15%)
PHA03307 <1090..>1181 CDD:223039 22/108 (20%)
C2H2 Zn finger 1250..1270 CDD:275368 13/19 (68%)
zf-H2C2_2 1262..1287 CDD:463886 16/24 (67%)
C2H2 Zn finger 1278..1299 CDD:275368 12/20 (60%)
KREPA <1402..>1482 CDD:483960 20/94 (21%)
zf-C2H2_6 1572..1593 CDD:433576 12/20 (60%)
C2H2 Zn finger 1573..1593 CDD:275368 12/19 (63%)
zf-H2C2_2 1585..1609 CDD:463886 14/23 (61%)
zf-C2H2 1599..1621 CDD:395048 11/21 (52%)
C2H2 Zn finger 1601..1621 CDD:275368 11/19 (58%)

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