DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11444 and pdap1a

DIOPT Version :9

Sequence 1:NP_001284863.1 Gene:CG11444 / 31388 FlyBaseID:FBgn0029715 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_997797.1 Gene:pdap1a / 322973 ZFINID:ZDB-GENE-030131-1693 Length:158 Species:Danio rerio


Alignment Length:220 Identity:85/220 - (38%)
Similarity:115/220 - (52%) Gaps:71/220 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRGKFVNHKGRSRHFTSPEEL------QQESEEDSDQTSGSGSDSDDKDAAGGKASSSASKAKA 59
            ||||....||||.:.|::|||:      |:|.||:                              
Zfish     1 MPRGGKKGHKGRGKQFSNPEEIDRQMRAQKELEEN------------------------------ 35

  Fly    60 PATRKAPVNRNQKSRSAAGAGAASSSESESGEDSDDDSEAEARDAKKGVASLIEIENPNRVTKKA 124
                             .||...||||||....|||:     :..:|||..||||||||||::|:
Zfish    36 -----------------GGAERGSSSESEEETSSDDE-----QPKRKGVEGLIEIENPNRVSQKS 78

  Fly   125 TQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRYEKLHAAGKTTEAKADLARLALIRQ 189
            .:   .:::|       .|...||||||||:||||:|::||.|||..|||.:|:|||||||:|::
Zfish    79 KK---VVEID-------VNAPKELSRREREEIEKQKAKERYMKLHLEGKTEQARADLARLAIIKK 133

  Fly   190 QREEAAAKRE---AEKKAADVGTKK 211
            |||:||.|||   .||:|.:..:|:
Zfish   134 QREDAAKKREELRKEKEAEEAKSKR 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11444NP_001284863.1 PP28 115..190 CDD:287254 39/74 (53%)
pdap1aNP_997797.1 PP28 69..147 CDD:287254 47/87 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589974
Domainoid 1 1.000 95 1.000 Domainoid score I7343
eggNOG 1 0.900 - - E1_KOG3375
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I4564
OMA 1 1.010 - - QHG60099
OrthoDB 1 1.010 - - D1572985at2759
OrthoFinder 1 1.000 - - FOG0004630
OrthoInspector 1 1.000 - - mtm6599
orthoMCL 1 0.900 - - OOG6_105501
Panther 1 1.100 - - O PTHR22055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5851
SonicParanoid 1 1.000 - - X3831
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.