Protein Alignment Usf and RTG3

DIOPT Version :9

• Sequence 1: NP_572167.3
• Gene: Usf / 31384
• FlyBaseID: FBgn0029711
• Length: 437
• Species: Drosophila melanogaster
• Sequence 2: NP_009447.1
• Gene: RTG3 / 852171
• SGDID: S000000199
• Length: 486
• Species: Saccharomyces cerevisiae
• Alignment Length: 450
• Identity: 93/450 - (20%)
• Similarity: 151/450 - (33%)
• Gaps: 154/450 - (34%)

  Fly    42 LMTITNHHTADLSEALVHSSFANGQQSLILTSDTGNPLMNSQGAQIFLTICGDENSDDSQEYYTI 106
            |:|.|.||..|..   :|.|...|.::         |....:.    |:.....||:|:
Yeast    33 LVTPTPHHNDDYK---IHGSAYPGGET---------PAQQHEK----LSYINTHNSNDN------ 75

  Fly   107 KQEPGCDLDIHSLLPSNLQLPNNLQLPTGCEIY----------------------LVKETGSLMG 149
                      ::|:.|  |..:|.|.||...||                      :.:.:.|.:|
Yeast    76 ----------NNLMGS--QARSNSQTPTASTIYEEAESQSSYLDDMFRTSQGGRPVTQNSISSIG 128

  Fly   150 EPPTKAAIKLELDTLSEK----PL---------LP--------------------SVTTSSSTQS 181
            :.|.:::..:..|:..::    ||         ||                    |.:.|||..|
Yeast   129 QGPLRSSYSMAYDSPVDRAMNTPLQQQEGLKAELPHDFLFQHGTDDTMYNLTDDLSSSLSSSINS 193

  Fly   182 AVITAQT------VNPPI--PGNINTTTSTTSTTTTTSVLYGS-------HGNGHGHGHAHAQAR 231
            .::|..|      .||..  |.::::|.|....:.::|...||       ||:.:.....|....
Yeast   194 DMMTPNTYSSSFSYNPQSLGPASVSSTYSPKVRSPSSSFRAGSFLSSSFRHGSINTPRTRHTSIS 258

  Fly   232 S-QPESAGQTPSSKLEAYKKRDDK---RRATHNEVERRRRDKINSWIFKLKEMLPSLSSSSSFSE 292
            | ..|:.|.....|:......|:|   :|..||.||||||:.|...|.:|.:::|
Yeast   259 SNMTENIGPGSVPKILGGLTSDEKLRRKREFHNAVERRRRELIKQKIKELGQLVP---------- 313

  Fly   293 ASTSPSTSGSTSTNGSSHSKGNASSSSGRAPPNDSKSQILIKACEYIKSMQGEIDTLRDCLRETD 357
                ||..             |......:..||  |..||.:..||::.:   .:.|....|:..
Yeast   314 ----PSLL-------------NYDDLGKQIKPN--KGIILDRTVEYLQYL---AEILEIQARKKK 356

  Fly   358 SLRASNQALREELDRLKRQQQLQERFHTAGG--------------RSTFNVTLNSLNSSA 403
            :|.|..:.|.|:...:..........|.:.|              ||..|..:|..||.|
Yeast   357 ALLAKIKELEEKKSSVAALSPFTNNHHASSGQNNSENSEERIIDIRSVPNALMNEQNSKA 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usf	NP_572167.3	HLH	255..343	CDD:278439	23/87 (26%)
RTG3	NP_009447.1	bHLHzip_USF_MITF	289..349	CDD:381393	22/91 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1318
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1708
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.930