Protein Alignment Usf and Usf1

DIOPT Version :9

• Sequence 1: NP_572167.3
• Gene: Usf / 31384
• FlyBaseID: FBgn0029711
• Length: 437
• Species: Drosophila melanogaster
• Sequence 2: NP_113965.1
• Gene: Usf1 / 83586
• RGDID: 620974
• Length: 310
• Species: Rattus norvegicus
• Alignment Length: 371
• Identity: 90/371 - (24%)
• Similarity: 142/371 - (38%)
• Gaps: 114/371 - (30%)

  Fly    50 TADLSEALVHSSFANGQQSLILTSD--TGNPLMNSQGAQIFLTICGDENSDDSQEYYTIKQEPGC 112
            ||:..|..|..     |:..:.|.:  |...:.:.|.|..|         .|....|..:.|.|.
  Rat     7 TAETEEGTVQI-----QEGAVATGEDPTSVAIASIQSAATF---------PDPNVKYVFRTENGG 57

  Fly   113 DLDIHSLLPSNLQLPNNLQLPTGCEIYLVKETGSLMGEPPTKAAIKLELDTLSEKPLLPSVTTSS 177
            .:....:..|..||...           .:.:|::.|.|.|:        ::::..:..:.|:..
  Rat    58 QVMYRVIQVSEGQLDGQ-----------TEGSGAISGYPATQ--------SMTQAVIQGAFTSDD 103

  Fly   178 STQSAVITAQTVNPPIP------GNINTTTSTTSTTTTTSVLYGSHGNGHGHGHAHAQARSQPES 236
            :..:....|:|.....|      |:..||:.:|:...||            .|......::.|.|
  Rat   104 AVDAEGTAAETHYTYFPSTAVGDGSGGTTSGSTTAVVTT------------QGSEALLGQATPPS 156

  Fly   237 AGQ-----TP-------------------SSKLEAYK-KRDDKRRATHNEVERRRRDKINSWIFK 276
            .||     :|                   |.|.||.: .||:||||.|||||||||||||:||.:
  Rat   157 TGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQ 221

  Fly   277 LKEMLPSLSSSSSFSEASTSPSTSGSTSTNGSSHSKGNASSSSGRAPPNDSKSQILIKACEYIKS 341
            |.:::|..|..                            |:.||:     ||..||.|||:||:.
  Rat   222 LSKIIPDCSME----------------------------STKSGQ-----SKGGILSKACDYIQE 253

  Fly   342 MQGEIDTLRDCLRETDSLRASNQALREELDRLKRQQQL---QERFH 384
            ::.....|.:.|:..|.|:..|..||::::.||.:..|   |.|.|
  Rat   254 LRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHH 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usf	NP_572167.3	HLH	255..343	CDD:278439	33/87 (38%)
Usf1	NP_113965.1	HLH	200..255	CDD:278439	33/87 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	52	1.000	Domainoid score	I11188
eggNOG	1	0.900	-	-		E1_KOG1318
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	77	1.000	Inparanoid score	I5152
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002665
OrthoInspector	1	1.000	-	-		otm45046
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR46117
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2414
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	9.010