Sequence 1: | NP_572167.3 | Gene: | Usf / 31384 | FlyBaseID: | FBgn0029711 | Length: | 437 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035610.1 | Gene: | Srebf1 / 20787 | MGIID: | 107606 | Length: | 1134 | Species: | Mus musculus |
Alignment Length: | 351 | Identity: | 75/351 - (21%) |
---|---|---|---|
Similarity: | 119/351 - (33%) | Gaps: | 112/351 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 HSLLPSNLQ--LPNNLQLPTGCEIYLVKETGSLMGEPPTKAAIKLELDTLSEKPLLPSVTTSSST 179
Fly 180 QSAVITAQTVNPPIP-------------GNINTTTSTTSTTTTTSVLYGSHGNGHGHGHAHAQAR 231
Fly 232 SQPESAGQT--------------PSSKLEAYKK-------RDDKRRATHNEVERRRRDKINSWIF 275
Fly 276 KLKEMLPSLSSSSSFSEASTSPSTSGSTSTNGSSHSKGNASSSSGRAPPNDSKSQILIKACEYIK 340
Fly 341 SMQGEIDTLRDCLRETDSLRASNQALREE---LDRLKRQQQLQERFHTAGGRSTFNVTLNSLNSS 402
Fly 403 ATSDLFEGIDTTPNLAAVSSLGFGKR 428 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Usf | NP_572167.3 | HLH | 255..343 | CDD:278439 | 21/87 (24%) |
Srebf1 | NP_035610.1 | Transcriptional activation (acidic). /evidence=ECO:0000250|UniProtKB:P36956 | 1..60 | ||
9aaTAD. /evidence=ECO:0000250|UniProtKB:P36956 | 27..35 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 46..73 | ||||
ERbeta_N | 114..210 | CDD:289279 | 16/53 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 130..149 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 170..195 | 8/29 (28%) | |||
Interaction with LMNA. /evidence=ECO:0000269|PubMed:11929849 | 227..487 | 54/277 (19%) | |||
HLH | 315..372 | CDD:238036 | 25/112 (22%) | ||
Leucine-zipper | 367..388 | 7/37 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 415..468 | 6/25 (24%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1708 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |