Protein Alignment Usf and sbp-1

DIOPT Version :9

• Sequence 1: NP_572167.3
• Gene: Usf / 31384
• FlyBaseID: FBgn0029711
• Length: 437
• Species: Drosophila melanogaster
• Sequence 2: NP_499472.1
• Gene: sbp-1 / 176574
• WormBaseID: WBGene00004735
• Length: 1113
• Species: Caenorhabditis elegans
• Alignment Length: 407
• Identity: 81/407 - (19%)
• Similarity: 125/407 - (30%)
• Gaps: 154/407 - (37%)

  Fly    90 TICGDENSDDSQEYYTIKQEPGCDLD-------IHSLLPSNLQ-------LPNNLQLPTGCEIYL 140
            :|.|:::| ..||||        |:|       :||||..|..       .|.|..|..|....|
 Worm    54 SIPGNQHS-PPQEYY--------DIDGQRDVSTLHSLLNHNNDDFFSMRFSPPNFDLGGGRGPSL 109

  Fly   141 VKETGSLMGEPPTKAAIKLELD---------------TLSEKPLLPSVTTSSSTQSAV------- 183
            . .|..|.||.|......|:..               :|:::...|::|...:....|
 Worm   110 A-ATQQLSGEGPASMLNPLQTSPPSGGYPPADAYRPLSLAQQLAAPAMTPHQAASLFVNTNGIDQ 173

  Fly   184 --ITAQTVNPPIPGNINTTTSTTSTTTTTSVLYGSHGNG-------------------------- 220
              .|...::||      ..||.|....|.::   .|.||
 Worm   174 KNFTHAMLSPP------HHTSMTPQPYTEAM---EHINGYMSPYDQAQGPSGPSYYSQHHQSPPP 229

  Fly   221 -HGHGHAHAQARSQPESAGQTPSSKLEAYKKRDDKRRATHNEVERRRRDKINSWIFKLKEMLPSL 284
             |.|.|...:....||   |..|..:|    ...:.:.||....:..:...|     :||.|..|
 Worm   230 HHHHHHPMPKIHENPE---QVASPSIE----DAPETKPTHLVEPQSPKSPQN-----MKEELLRL 282

  Fly   285 SSSSSFSEAS--TSPSTSGSTSTNGSSHSKGNAS------------------SSSG--------- 320
            ..:.|.||..  .:..:...::|||.|.||..|:                  |.||
 Worm   283 LVNMSPSEVERLKNKKSGACSATNGPSRSKEKAAKIVIQETAEGDEDEDDEDSDSGETMSQGTTI 347

  Fly   321 --------------------RAPPNDSKSQILIKAC----EYIKSMQGEIDTLRDCLRETDSLRA 361
                                |...||...|:.:..|    :..||.     |||..:...:.:..
 Worm   348 IVRRPKTERRTAHNLIEKKYRCSINDRIQQLKVLLCGDEAKLSKSA-----TLRRAIEHIEEVEH 407

  Fly   362 SNQALREELDRLKRQQQ 378
            .||.|:..::::::..|
 Worm   408 ENQVLKHHVEQMRKTLQ 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usf	NP_572167.3	HLH	255..343	CDD:278439	27/140 (19%)
sbp-1	NP_499472.1	Atrophin-1	30..>272	CDD:367360	49/243 (20%)
		bHLH_SF	351..423	CDD:381792	13/76 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1708
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030