DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usf and Mitf

DIOPT Version :10

Sequence 1:NP_572167.3 Gene:Usf / 31384 FlyBaseID:FBgn0029711 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001106669.1 Gene:Mitf / 17342 MGIID:104554 Length:526 Species:Mus musculus


Alignment Length:474 Identity:81/474 - (17%)
Similarity:135/474 - (28%) Gaps:182/474 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 HKRPRLNMEFGSSTSNTNTSTSPSSVNISNANPTAGPGLMTITNHHTADLSEALVHSSFANGQQS 68
            |:.|:...|..|....:::|...|..    :.|......||         |..|:.......|..
Mouse    18 HEEPKTYYELKSQPLKSSSSAEHSGA----SKPPLSSSTMT---------SRILLRQQLMREQMQ 69

  Fly    69 LILTSDTGNPLMNSQGAQIFLTICGDENSDDSQEYYTIKQEPGCDLDIHSLLPSNLQLPNNLQLP 133
               ..:........|.||..            |:...:.|.|..::.:.:.|||..|:|      
Mouse    70 ---EQERREQQQKLQAAQFM------------QQRVAVSQTPAINVSVPTTLPSATQVP------ 113

  Fly   134 TGCEIYLVKETGSLMGEPPTKAAIKLELDTLSEKPLLPSVTTSSSTQSAVITAQTVN-------P 191
                :.::|....|  |.|||..|: :......|..| |.|.::...|.|:::...|       |
Mouse   114 ----MEVLKVQTHL--ENPTKYHIQ-QAQRHQVKQYL-STTLANKHASQVLSSPCPNQPGDHAMP 170

  Fly   192 PIPGNINTTTSTTSTTTTTSVLYGSHGNGHGHGHAHAQARSQPESAGQTPSSK------------ 244
            |:||      |:...:....:...|:...........|:|::.|..|....|:            
Mouse   171 PVPG------SSAPNSPMAMLTLNSNCEKEAFYKFEEQSRAESECPGMNTHSRASCMQMDDVIDD 229

  Fly   245 --------------------------------LEAYKK--------------------------- 250
                                            ::.|..                           
Mouse   230 IISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYSNQGLPPPGLTISNSCPANLPNIKRELTA 294

  Fly   251 -------------RDDKRRATHNEVERRRRDKINSWIFKLKEMLPSLSSSSSFSEASTSPSTSGS 302
                         ::.:::..||.:|||||..||..|.:|..::|.          |..|.... 
Mouse   295 CIFPTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPK----------SNDPDMRW- 348

  Fly   303 TSTNGSSHSKGNASSSSGRAPPNDSKSQILIKACEYIKSMQGEIDTLRDCLRETDSLRASNQALR 367
                                    :|..||..:.:||:.:|.|....:|.......|..:|:.| 
Mouse   349 ------------------------NKGTILKASVDYIRKLQREQQRAKDLENRQKKLEHANRHL- 388

  Fly   368 EELDRLKRQQQL--QERFH 384
                 |.|.|:|  |.|.|
Mouse   389 -----LLRVQELEMQARAH 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UsfNP_572167.3 bHLH_SF 258..347 CDD:469605 21/88 (24%)
MitfNP_001106669.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..54 6/37 (16%)
MITF_TFEB_C_3_N 56..194 CDD:464952 33/172 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..179 7/29 (24%)
Transactivation. /evidence=ECO:0000250 224..291 1/66 (2%)
bHLHzip_MITF 300..403 CDD:381496 32/144 (22%)
Leucine-zipper. /evidence=ECO:0000305|PubMed:23207919 374..395 6/26 (23%)
DUF3371 397..522 CDD:463372 3/6 (50%)
DNA-binding regulation. /evidence=ECO:0000250 401..431 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..526
Blue background indicates that the domain is not in the aligned region.

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