DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHOp24 and ERP3

DIOPT Version :9

Sequence 1:NP_001284862.1 Gene:CHOp24 / 31382 FlyBaseID:FBgn0029709 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_010266.1 Gene:ERP3 / 851544 SGDID:S000002176 Length:225 Species:Saccharomyces cerevisiae


Alignment Length:213 Identity:39/213 - (18%)
Similarity:80/213 - (37%) Gaps:61/213 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPD--NHVMHESEKESS 81
            |..|:.|.|.....|:                        .||:.:|..||  |..:.|...|..
Yeast    45 CTISYYFAVQQGESND------------------------FDVNYEIFAPDDKNKPIIERSGERQ 85

  Fly    82 GKYTFVAPAKGTYTVCF----------------NNERSSMTPKLVMFSIDVGDAPQRAPGAPGEE 130
            |:::|:...||.|.:||                |.||..          |:.:..::|..|  :.
Yeast    86 GEWSFIGQHKGEYAICFYGGKAHDKIVDLDFKYNCERQD----------DIRNERRKARKA--QR 138

  Fly   131 EVGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNE-------NTNSRVVLWSTFEALVLV 188
            .:..:|.:.:...:..::.:::.:...:....:.::|.|.       :|..|:|::|.:..|:::
Yeast   139 NLRDSKTDPLQDSVENSIDTIERQLHVLERNIQYYKSRNTRNHHTVCSTEHRIVMFSIYGILLII 203

  Fly   189 LMTVGQVYYLKRFFEVKR 206
            .|:..|:..|:..|...|
Yeast   204 GMSCAQIAILEFIFRESR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHOp24NP_001284862.1 EMP24_GP25L 24..203 CDD:279450 35/203 (17%)
ERP3NP_010266.1 EMP24_GP25L 23..218 CDD:395878 37/208 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53803
OrthoFinder 1 1.000 - - FOG0000272
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22811
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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