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Protein Alignment CHOp24 and tmed1

DIOPT Version :9

Sequence 1:	NP_001284862.1	Gene:	CHOp24 / 31382	FlyBaseID:	FBgn0029709	Length:	208	Species:	Drosophila melanogaster
Sequence 2:	NP_001039263.1	Gene:	tmed1 / 734138	XenbaseID:	XB-GENE-1017173	Length:	220	Species:	Xenopus tropicalis

Alignment Length:	193	Identity:	57/193 - (29%)
Similarity:	87/193 - (45%)	Gaps:	22/193 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    31 AHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYT 95
            |..:|||::.........:.::||.|..||||..::.|...::....:.|.|.:|......|.|.
Frog    33 AGRQECFYQTTLYNGSMEIEYQVIGGAGLDVDFSVTTPSGILLIMERRRSDGVHTVEPTEAGDYM 97

  Fly    96 VCFNNERSSMTPKLVMFSI----DVGD-APQRAPGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQ 155
            :||:|..|:::.|||.|.:    ..|| .|.........:|:...|||| |:|   ::.|||...
Frog    98 ICFDNSFSTISEKLVFFELIFDNQQGDEEPDSWADVVEPDELLDIKLED-IKE---SIESVKSRL 158

  Fly   156 E----------YMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVKRVV 208
            |          ....||   |::.::...||..||.....|||.:...|||.||..|:.||.:
Frog   159 ERSIQMQTVLRAFEARD---RNLQDSNLERVNFWSAINVGVLVTVAFLQVYMLKSLFDDKRKI 218

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.