Protein Alignment CHOp24 and tmed4

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_001002134.2
• Gene: tmed4 / 415224
• ZFINID: ZDB-GENE-040625-140
• Length: 222
• Species: Danio rerio
• Alignment Length: 221
• Identity: 57/221 - (25%)
• Similarity: 103/221 - (46%)
• Gaps: 32/221 - (14%)

  Fly    12 VGSLLIL--CRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVID-----------GGF----- 58
            ||.||:.  ...|.|....:....::||.|.:...|.      ||.           |.|
Zfish    10 VGFLLLFVWLSPSQALYFHIGETEKKCFIEEIPDETM------VIGRYRTQLWDKQAGSFLPSTP 68

  Fly    59 -LDVDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMT----PKL-VMFSIDVG 117
             |.:.::|..|:..|:...:..|.|::||.:...|.:.:|.::..:.|.    .|| |...|.||
Zfish    69 GLGMHVEIKDPETKVILSRQYGSDGRFTFTSHTPGEHQICLHSNSTKMALFAGGKLRVHLDIQVG 133

  Fly   118 DAPQRAPGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTF 182
            :.....|....::::  |:|:..:|:|...:..::.||.|...|::..|..:|:||.||:.||..
Zfish   134 EHTNNYPEIAAKDKL--TELQLRVRQLLDQVEQIQKEQNYQRYREERFRMTSESTNQRVLWWSIA 196

  Fly   183 EALVLVLMTVGQVYYLKRFFEVKRVV 208
            :.::|::..:.|:.:||.|||.|::|
Zfish   197 QTVILIITGIWQMKHLKSFFEAKKLV 222

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	48/200 (24%)
tmed4	NP_001002134.2	EMP24_GP25L	24..217	CDD:426051	48/200 (24%)