Protein Alignment CHOp24 and tmed5

DIOPT Version :9

• Sequence 1: NP_001284862.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_956697.1
• Gene: tmed5 / 393374
• ZFINID: ZDB-GENE-040426-1302
• Length: 225
• Species: Danio rerio
• Alignment Length: 218
• Identity: 60/218 - (27%)
• Similarity: 104/218 - (47%)
• Gaps: 33/218 - (15%)

  Fly    12 VGSLLILCRTSHAFIVSVD--------AHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGP 68
            |..|.:....:.||..|:|        |...||||:.::......:.::|:||..||||.:::.|
Zfish    12 VACLSVCVSLASAFSQSLDSDFTFTLAAGRRECFFQTMKKDASLEIEYQVLDGASLDVDFQLNSP 76

  Fly    69 DNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEE-- 131
            ..|::....::|.|.:| |...:|.|..||:|..|:::.|::.|.:.:.:.        ||:|
Zfish    77 SGHIIASDYRKSDGVHT-VETEEGDYMFCFDNTFSAVSEKVIFFELILDNM--------GEDEES 132

  Fly   132 ------VGHTKLEDM-IRELSGTLTSVKHE-------QEYMHVRDKIHRSVNENTNSRVVLWSTF 182
                  |....|.|| :.::..|:.:||..       |..:...:...|::.|:...||.|||..
Zfish   133 EDWKAYVQGADLLDMKLEDIMDTINNVKSRLGKSLQIQTLLRAFEARDRNLQESNYERVNLWSCT 197

  Fly   183 EALVLVLMTVGQVYYLKRFFEVK 205
            ..||:|:::..|||.|:..||.|
Zfish   198 NVLVMVIVSGVQVYLLRSLFEDK 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_001284862.1	EMP24_GP25L	24..203	CDD:279450	55/202 (27%)
tmed5	NP_956697.1	EMP24_GP25L	32..218	CDD:279450	51/194 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000272
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.910