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Protein Alignment CHOp24 and Tmed5
DIOPT Version :9
Sequence 1: | NP_001284862.1 |
Gene: | CHOp24 / 31382 |
FlyBaseID: | FBgn0029709 |
Length: | 208 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001007620.1 |
Gene: | Tmed5 / 289883 |
RGDID: | 1359437 |
Length: | 229 |
Species: | Rattus norvegicus |
Alignment Length: | 191 |
Identity: | 52/191 - (27%) |
Similarity: | 95/191 - (49%) |
Gaps: | 10/191 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 FIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPDNHVMHESEKESSGKYTFVAP 89
|..::.|..:|||::.:.......:.::|:|||.||:|..::.|:...:...:::|.|.:| |..
Rat 36 FTFTLPAGQKECFYQPMPLKASLEIEYQVLDGGELDIDFHLASPEGRTLVFEQRKSDGVHT-VET 99
Fly 90 AKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPG------EEEVGHTKLEDM---IRELS 145
..|.|..||:|..|:::.|::.|.:.:.:..:...|... ..:|...||||: |..:.
Rat 100 EDGDYMFCFDNTFSTISEKVIFFELILDNMGEEVEGQEDWKKYITNTDVLEMKLEDILESINSIK 164
Fly 146 GTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVKR 206
..|:...|.|..:...:...|::.|:...||..||....:|:|:::..|||.||..||.||
Rat 165 SRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSVVNLMVMVVVSAIQVYTLKSLFEDKR 225
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000272 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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