DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHOp24 and erp2

DIOPT Version :10

Sequence 1:NP_572165.1 Gene:CHOp24 / 31382 FlyBaseID:FBgn0029709 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_001342850.1 Gene:erp2 / 2542439 PomBaseID:SPAC17A5.08 Length:210 Species:Schizosaccharomyces pombe


Alignment Length:203 Identity:53/203 - (26%)
Similarity:97/203 - (47%) Gaps:7/203 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLLLVG-SLLILCRTSHAFIVSVDAHNEE--CFF-ENVEGGTKFGVTFEVIDGGFLDVDIKISG 67
            :|:.|.| :|.:|...:.|..::....|:|  |:: ::...|.|...|:.|..||..|||..|..
pombe     2 RVITLSGITLFLLASLASAIELTFKLENQEKQCYYLDSFHTGEKTHFTYAVQSGGSFDVDYMIKA 66

  Fly    68 PDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEV 132
            |....:...:|.......|....||.|..||:|..|:.|.|:|...|.: :.....|....:|..
pombe    67 PSQKTVALGKKRRQADVFFTLEEKGEYEFCFDNHMSTFTDKIVTMEITM-ENELSLPALTRDEAK 130

  Fly   133 GHTK--LEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQV 195
            .:.|  ::..:.|:|..|:.:...|.|...|:..:.|..::|.:|:..:|..|::::|.::..||
pombe   131 DYKKDSMQSTVLEISTALSEIDRVQNYFKTREHRNYSTVKSTQARIFWFSLAESIMVVALSALQV 195

  Fly   196 YYLKRFFE 203
            :.:|.||:
pombe   196 FIVKTFFK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHOp24NP_572165.1 EMP24_GP25L 24..203 CDD:426051 47/183 (26%)
erp2NP_001342850.1 EMP24_GP25L 22..203 CDD:426051 46/181 (25%)

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