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Protein Alignment CHOp24 and TMED3

DIOPT Version :9

Sequence 1:	NP_001284862.1	Gene:	CHOp24 / 31382	FlyBaseID:	FBgn0029709	Length:	208	Species:	Drosophila melanogaster
Sequence 2:	NP_031390.1	Gene:	TMED3 / 23423	HGNCID:	28889	Length:	217	Species:	Homo sapiens

Alignment Length:	217	Identity:	74/217 - (34%)
Similarity:	107/217 - (49%)	Gaps:	15/217 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MESTL---AKVLLLVGSLLIL------CRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDG 56
            |.||:   |.||||   ||:|      |.....|.:..:|  ::||.|.||.|.||.:.::||.|
Human     1 MGSTVPRSASVLLL---LLLLRRAEQPCGAELTFELPDNA--KQCFHEEVEQGVKFSLDYQVITG 60

  Fly    57 GFLDVDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQ 121
            |..|||..:..|..:.::...|:....:|:.|..||.|..||:||.|:.:.|.|.|...|||.|.
Human    61 GHYDVDCYVEDPQGNTIYRETKKQYDSFTYRAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEPP 125

  Fly   122 RAPGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALV 186
            ..|.. |......|::|.....:...|.:|...|.:..:|:...|:..|:.||||..||..|.:.
Human   126 ILPDM-GNRVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIA 189

  Fly   187 LVLMTVGQVYYLKRFFEVKRVV 208
            |.:::..||..||.||..||.:
Human   190 LFVVSFSQVLLLKSFFTEKRPI 211

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.