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Protein Alignment CHOp24 and TMED4

DIOPT Version :10

Sequence 1:	NP_572165.1	Gene:	CHOp24 / 31382	FlyBaseID:	FBgn0029709	Length:	208	Species:	Drosophila melanogaster
Sequence 2:	NP_872353.2	Gene:	TMED4 / 222068	HGNCID:	22301	Length:	227	Species:	Homo sapiens

Alignment Length:	218	Identity:	54/218 - (24%)
Similarity:	101/218 - (46%)	Gaps:	33/218 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 LLILCRT-SHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGF------------------LD 60
            ||.||.| :......:....:.||.|.:...|       ::.|.:                  |.
Human    19 LLALCATGAQGLYFHIGETEKRCFIEEIPDET-------MVIGNYRTQMWDKQKEVFLPSTPGLG 76

  Fly    61 VDIKISGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMT----PKL-VMFSIDVGDAP 120
            :.:::..||..|:...:..|.|::||.:...|.:.:|.::..:.|.    .|| |...|.||:..
Human    77 MHVEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVGEHA 141

  Fly   121 QRAPGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEAL 185
            ...|....::::  |:|:...|:|...:..::.||:|...|::..|..:|:||.||:.||..:.:
Human   142 NNYPEIAAKDKL--TELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWWSIAQTV 204

  Fly   186 VLVLMTVGQVYYLKRFFEVKRVV 208
            :|:|..:.|:.:||.|||.|::|
Human   205 ILILTGIWQMRHLKSFFEAKKLV 227

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.