Protein Alignment CHOp24 and tmed-4

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_507861.1
• Gene: tmed-4 / 180307
• WormBaseID: WBGene00013360
• Length: 211
• Species: Caenorhabditis elegans
• Alignment Length: 211
• Identity: 48/211 - (22%)
• Similarity: 98/211 - (46%)
• Gaps: 15/211 - (7%)

  Fly    11 LVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVI----------DGGFLDVDIKI 65
            |:.:||.|...:.:....:....::||.|.:...|.....::|.          |...:.:.:::
 Worm     3 LLIALLSLATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNIGMHVEV 67

  Fly    66 SGPDNHVMHESEKESSGKYTFVAPAKGTYTVC-FNNERSSMTPKLVMFSIDV--GDAPQRAPGAP 127
            ..|::.|:......:.|::||.:...|.:.:| ::|..:......:...:|:  ||..|......
 Worm    68 KDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQDYAQIA 132

  Fly   128 GEEEVGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTV 192
            .::::...:|.  ||:|...:..:..||.|...|::..|..:|:|||||..||..:.:||.:...
 Worm   133 QKDKLNELQLR--IRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVLAITGA 195

  Fly   193 GQVYYLKRFFEVKRVV 208
            .|:.:|:.|||.|::|
 Worm   196 WQMRHLRGFFEAKKLV 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	40/191 (21%)
tmed-4	NP_507861.1	EMP24_GP25L	16..206	CDD:426051	40/191 (21%)