DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHOp24 and sel-9

DIOPT Version :9

Sequence 1:NP_001284862.1 Gene:CHOp24 / 31382 FlyBaseID:FBgn0029709 Length:208 Species:Drosophila melanogaster
Sequence 2:NP_001370673.1 Gene:sel-9 / 179213 WormBaseID:WBGene00004766 Length:203 Species:Caenorhabditis elegans


Alignment Length:186 Identity:106/186 - (56%)
Similarity:147/186 - (79%) Gaps:1/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPDNHVMHESEKESSGKYTFVA 88
            ::.:.|||:.|:|||:.:..|||.|:.|||.:|||||:|:||:||||..:::.|:|||||:||.|
 Worm    18 SYFIHVDANEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAA 82

  Fly    89 PAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVG-HTKLEDMIRELSGTLTSVK 152
            ...|.||.||.|:.|:||||.|||::::.:..|:||||...::.. :.|||:|:||||..|.|||
 Worm    83 HMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSALMSVK 147

  Fly   153 HEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVKRVV 208
            ||||||.||:::||::|||||||||:|:.|||.|||.|||||::||||||||:.:|
 Worm   148 HEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFFEVRTMV 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHOp24NP_001284862.1 EMP24_GP25L 24..203 CDD:279450 102/179 (57%)
sel-9NP_001370673.1 EMP24_GP25L 21..198 CDD:395878 102/176 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166445
Domainoid 1 1.000 231 1.000 Domainoid score I1388
eggNOG 1 0.900 - - E1_KOG1692
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55991
Inparanoid 1 1.050 235 1.000 Inparanoid score I2145
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53803
OrthoDB 1 1.010 - - D1328081at2759
OrthoFinder 1 1.000 - - FOG0000272
OrthoInspector 1 1.000 - - oto20174
orthoMCL 1 0.900 - - OOG6_101558
Panther 1 1.100 - - LDO PTHR22811
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R395
SonicParanoid 1 1.000 - - X4219
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

Return to query results.
Submit another query.