Protein Alignment CHOp24 and tmed-1

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_502288.1
• Gene: tmed-1 / 178145
• WormBaseID: WBGene00010670
• Length: 234
• Species: Caenorhabditis elegans
• Alignment Length: 219
• Identity: 59/219 - (26%)
• Similarity: 98/219 - (44%)
• Gaps: 22/219 - (10%)

  Fly     3 STLAKVLLLVGSLLILCRTSHAFIVSVDAHNEECFFENVE--GGTKFGVTFEVIDGGFLDVDIKI 65
            :.:..|:||: :..||| ..:.|.|.|.|...:|||:.|:  ......|.::|||||.|:::..|
 Worm     5 TNIITVILLI-TPFILC-GEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGGDLNINFMI 67

  Fly    66 SGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGA---- 126
            ....| ::.:.:.:..|.:.......|.|.|||:|..|..:.|:|.|.|.:.||......|
 Worm    68 LHGAN-ILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLDEADLSA 131

  Fly   127 ---------PGEEEVGHTKLEDMIRELSG---TLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLW 179
                     ....|:|.| :::..|..:|   .|..|::.|..:...:...|:|......||..|
 Worm   132 MARTDSDLSAKMNELGVT-IDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDRVTFW 195

  Fly   180 STFEALVLVLMTVGQVYYLKRFFE 203
            |....||:|.:...||:.::..||
 Worm   196 SVVHTLVMVGVAGVQVFMIRSLFE 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	51/196 (26%)
tmed-1	NP_502288.1	EMP24_GP25L	24..219	CDD:426051	51/196 (26%)