Protein Alignment CHOp24 and tmed-3

DIOPT Version :10

• Sequence 1: NP_572165.1
• Gene: CHOp24 / 31382
• FlyBaseID: FBgn0029709
• Length: 208
• Species: Drosophila melanogaster
• Sequence 2: NP_491892.1
• Gene: tmed-3 / 172372
• WormBaseID: WBGene00019003
• Length: 203
• Species: Caenorhabditis elegans
• Alignment Length: 199
• Identity: 60/199 - (30%)
• Similarity: 101/199 - (50%)
• Gaps: 5/199 - (2%)

  Fly    10 LLVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPDNHVMH 74
            ::|.|:|:....|......:..:..:||:|:::........|:|:.||..|||:.|..|:..|::
 Worm     5 VIVSSILVALGLSIELTFELPDNANQCFYEDLKKDVDTVFEFQVVTGGHYDVDLIIEDPNGKVLY 69

  Fly    75 ESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVGH--TKL 137
            :..|:......|.|..:|||..||:||.|:.:.|:|......||  |.|..| ...:..|  |:|
 Worm    70 KDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGD--QNALHA-AVTQGAHAMTQL 131

  Fly   138 EDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLKRFF 202
            |:....:...|.::...|.:..:|:...|...|..|.||::||..::.|:|.:.:|||:.||.||
 Worm   132 ENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIGIGQVFLLKSFF 196

  Fly   203 EVKR 206
            ..||
 Worm   197 NDKR 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHOp24	NP_572165.1	EMP24_GP25L	24..203	CDD:426051	53/180 (29%)
tmed-3	NP_491892.1	EMP24_GP25L	19..197	CDD:426051	53/180 (29%)