DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHOp24 and CHOp24

DIOPT Version :10

Sequence 1:NP_572165.1 Gene:CHOp24 / 31382 FlyBaseID:FBgn0029709 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_318076.4 Gene:CHOp24 / 1278482 VectorBaseID:AGAMI1_001314 Length:205 Species:Anopheles gambiae


Alignment Length:204 Identity:130/204 - (63%)
Similarity:166/204 - (81%) Gaps:2/204 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLL--LVGSLLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPD 69
            |:||  ||..||:.......:.::||.|:|||||:..|.|||.|:.||.::|||||::::|||||
Mosquito     2 KLLLNFLVCFLLLCVVPIRGYFITVDPHSEECFFDRAEAGTKLGLMFETVEGGFLDIEVRISGPD 66

  Fly    70 NHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVGH 134
            ..|:::.||||||||||.|...|.|..||:|:.|::|||:||||:::|:||:...||..|.|.||
Mosquito    67 QKVIYQGEKESSGKYTFSAYETGIYHYCFSNKMSTLTPKVVMFSMEIGEAPKGTVGAVNEGEAGH 131

  Fly   135 TKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVYYLK 199
            ||||||||||||||||:||||:||||||:||||:||:||||||:||.|||:||::||||||||||
Mosquito   132 TKLEDMIRELSGTLTSIKHEQDYMHVRDRIHRSINESTNSRVVMWSFFEAIVLIVMTVGQVYYLK 196

  Fly   200 RFFEVKRVV 208
            |||||||||
Mosquito   197 RFFEVKRVV 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHOp24NP_572165.1 EMP24_GP25L 24..203 CDD:426051 116/178 (65%)
CHOp24XP_318076.4 None

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