DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHOp24 and p24-1

DIOPT Version :10

Sequence 1:NP_572165.1 Gene:CHOp24 / 31382 FlyBaseID:FBgn0029709 Length:208 Species:Drosophila melanogaster
Sequence 2:XP_309138.4 Gene:p24-1 / 1270444 VectorBaseID:AGAMI1_009892 Length:224 Species:Anopheles gambiae


Alignment Length:205 Identity:64/205 - (31%)
Similarity:101/205 - (49%) Gaps:18/205 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SLLILCRTSHAFIVS--------VDAHNEECFFENVEGGTKFGVTFEVIDGGFLDVDIKISGPDN 70
            ::::|....|...||        :..:.:|||.|.::......:.|:|:.||..|||:.:..|..
Mosquito    16 AIIVLFALCHQIPVSQCVELTFELPDNAKECFHEEIQKNQTAALEFQVVSGGRYDVDVTLESPTG 80

  Fly    71 HVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMFSIDVGDAPQRAPGAPGEEEVGH- 134
            .|::...|.....|.|||.|.|.|..||:||.|:.:.|:|.....||   :.|| .||.||  | 
Mosquito    81 EVIYRQIKTQFDSYQFVAAATGIYVACFSNEFSTFSHKIVYMDFQVG---EEAP-LPGIEE--HA 139

  Fly   135 ---TKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTFEALVLVLMTVGQVY 196
               |:||...:|:...|.::...|.:..:|:...|...|:.|.||:.||..|...::|:.:|||.
Mosquito   140 TVLTQLETSAQEIHKGLNAILDYQTHHRLREAQGRKRAEDLNERVLWWSLTETAAILLIAIGQVL 204

  Fly   197 YLKRFFEVKR 206
            .|:.||..|:
Mosquito   205 VLRNFFSEKK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHOp24NP_572165.1 EMP24_GP25L 24..203 CDD:426051 60/190 (32%)
p24-1XP_309138.4 None

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